Non-Coding RNA Search

Ss1.1-rcbe07_l13.5

Sequence:


               
               TAAAGAGGTTGCCAATGTATGACAAAAGTAGTGAGAAAATAAATACATTGTGTATACTTT
GTGTTAAAATTCTTAAGATTGTTTTGAAAACGACTGGAGGAGGTGAAATTGTTAAAGTCC
CTTCTAAGTGCTTATTACACCTGTCCACTAGGTTGACAGAGATAAGAAGGGGAAGGGTTC
TAGGCCAATGTTCCTGTTTAGAAGACACTTTGAGATTATGGCCTTTGTGTGCAATTTGTT
CAATACCACATGTATGTAAACTTAAATCCTTATTTGAAACATCTAGTCTTTCTGGATGTT
TAAAAGTGTACAACATATGTTAAAAGTAGATAAAGTAACACCTTTTAAGTATTTTTTCTG
TGAATTCATAGGAATGGTCACATGTGAGGAATGGGATTGTTAAACTTGAGCCTTGGAGAC
TATGCTGACTGATCACTGGGGTGGTGGGGGTTGGAGGGACAGGGAAGGAAGTGCAGAGAA
GGGTTCAGTGCTCTAAAGACAGGTTCAGACTGTCTAGCCATTGTTCTGTTTGTGCATTTT
AGTTAATATTGCTGTGTATTAAGGAATAAACAAGTCCTACTGTTCAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAAGAGGTTGCCAATGTATGACAAAAGTAGTGAGAAAATAAATACATTGTGTATACTTT
GTGTTAAAATTCTTAAGATTGTTTTGAAAACGACTGGAGGAGGTGAAATTGTTAAAGTCC
CTTCTAAGTGCTTATTACACCTGTCCACTAGGTTGACAGAGATAAGAAGGGGAAGGGTTC
TAGGCCAATGTTCCTGTTTAGAAGACACTTTGAGATTATGGCCTTTGTGTGCAATTTGTT
CAATACCACATGTATGTAAACTTAAATCCTTATTTGAAACATCTAGTCTTTCTGGATGTT
TAAAAGTGTACAACATATGTTAAAAGTAGATAAAGTAACACCTTTTAAGTATTTTTTCTG
TGAATTCATAGGAATGGTCACATGTGAGGAATGGGATTGTTAAACTTGAGCCTTGGAGAC
TATGCTGACTGATCACTGGGGTGGTGGGGGTTGGAGGGACAGGGAAGGAAGTGCAGAGAA
GGGTTCAGTGCTCTAAAGACAGGTTCAGACTGTCTAGCCATTGTTCTGTTTGTGCATTTT
AGTTAATATTGCTGTGTATTAAGGAATAAACAAGTCCTACTGTTCAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-579, gnl|bosTau2|chr6 (13099938-13099330)
               

               
               2-579, gnl|Hg17|chr3 (134998712-134999313)
               

               
               2-579, gnl|Mm7|chr2 (39423507-39422665)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-579, gnl|bosTau2|chr6 (13099938-13099330)
               

               
               2-579, gnl|Hg17|chr3 (134998712-134999313)
               

               
               2-579, gnl|Mm7|chr2 (39423507-39422665)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               cbe (0.239234)
               

               
               csk (0.140746)
               

               
               kid (0.129735)
               

               
               bla (0.124347)
               

               
               ecc (0.115035)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.239234)
               

               
               csk (0.140746)
               

               
               kid (0.129735)
               

               
               bla (0.124347)
               

               
               ecc (0.115035)

	2-579, gnl\|bosTau2\|chr6 (13099938-13099330)
	2-579, gnl\|Hg17\|chr3 (134998712-134999313)
	2-579, gnl\|Mm7\|chr2 (39423507-39422665)

	cbe (0.239234)
	csk (0.140746)
	kid (0.129735)
	bla (0.124347)
	ecc (0.115035)