Ss1.1-rcbe08_d12.5S
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTTCTTCTCGAAAGCCCCGACTTGAAAACCGGAAAAAAGTTCACAAGATGGAAGAAAAT GGGGACATGCCTACAAAGCTGAGGAAGCTGGACCTGAGTAGTAATCAAGAAGCGACAGAA AAAGAAGTAGAAAGAATCTTGGGATTGTTGCAAACATACTTTAGAAAGTATCCTGATACT CCCGTGTCCTATTTTGAGTTTGTGATTGATCCAAATTCTTTTTCTCGTACTGTGGAGAAT ATATTTTATGTTTCTTTCATTATAAGGGATGGTTTTGCAAGAATAAGGCTTGACCAAGAC AGGCTGCCAATATTAGAGCCAATTAATATGAACCAAGTGGGTGAGGGAAATGATCCCAGT TCCCATGGCAGGAAACAAGGGGTTATATCTTTGAGTTTACAGGACTGGAAAAATATTGTG GCAACTTTTGAAATTTCAGAGGCTATGATCACAAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTTCTTCTCGAAAGCCCCGACTTGAAAACCGGAAAAAAGTTCACAAGATGGAAGAAAAT GGGGACATGCCTACAAAGCTGAGGAAGCTGGACCTGAGTAGTAATCAAGAAGCGACAGAA AAAGAAGTAGAAAGAATCTTGGGATTGTTGCAAACATACTTTAGAAAGTATCCTGATACT CCCGTGTCCTATTTTGAGTTTGTGATTGATCCAAATTCTTTTTCTCGTACTGTGGAGAAT ATATTTTATGTTTCTTTCATTATAAGGGATGGTTTTGCAAGAATAAGGCTTGACCAAGAC AGGCTGCCAATATTAGAGCCAATTAATATGAACCAAGTGGGTGAGGGAAATGATCCCAGT TCCCATGGCAGGAAACAAGGGGTTATATCTTTGAGTTTACAGGACTGGAAAAATATTGTG GCAACTTTTGAAATTTCAGAGGCTATGATCACAAAC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 121-280, + strand, RNAz p=0.864205 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 121-280, + strand, RNAz p=0.864205 |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 2-456, gnl|bosTau2|chr2 (19690238-19689784) | |
| 2-456, gnl|Hg17|chr12 (103200715-103201172) | |
| 2-456, gnl|Mm7|chr10 (82408877-82409331) | |
| 117-452, gnl|bosTau2|chr11 (49059142-49058799) | |
| 117-452, gnl|Hg17|chr2 (69410607-69410952) | |
| 117-452, gnl|Mm7|chr6 (87197584-87197245) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-456, gnl|bosTau2|chr2 (19690238-19689784) | |
| 2-456, gnl|Hg17|chr12 (103200715-103201172) | |
| 2-456, gnl|Mm7|chr10 (82408877-82409331) | |
| 117-452, gnl|bosTau2|chr11 (49059142-49058799) | |
| 117-452, gnl|Hg17|chr2 (69410607-69410952) | |
| 117-452, gnl|Mm7|chr6 (87197584-87197245) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| cbe (0.239234) | |
| fhi (0.169578) | |
| ski (0.146735) | |
| lyg (0.133103) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbe (0.239234) | |
| fhi (0.169578) | |
| ski (0.146735) | |
| lyg (0.133103) |