Non-Coding RNA Search

Ss1.1-rcbe14_m3.5

Sequence:


               
               ATACATCGGGACTTAAAGCCAGAGAATGTTCTACTCTCATCTCAAAAAGAGGACTGTCTT
ATAAAGATTCCTGATTTTGGGCAGTCCAAGATTTTGGGAGAGACCTCTCTCATGAGAACC
TTATGTGGTACCCCCACCTACCTGGCTCCCGAGGTTCTTAATTCCTTGGGAACTGCCGGA
TATAACCGTGCTGTGGACTGCTGGAGTTTAGGAGTTATTCTTTTCATTTGCCTTAGTGGG
TATCCACCTTTCTCTGAGCATAAGAGTCAAGTGTCACTGAAGGATCAGATCACCAGTGGA
AAATACAACTTCATTCCTGGAGTCTGGGCAGAAGTCTCAGAGAAGGCTCTGGACCTTGTC
AAGAAGTTGTTGATAGTGGATCCAAAGGCACGTTTTACGACAGAAGAAGCTTTAAGACAT
CCATGGCTTCAGGATGAGGACATGAAGAGAAAATTTAAGAATTTGCTTTTTGAAGAAGAC
AAGTCCACAGCTCTGTCTCAGGTTCCAGCCCAGCCTTCTACAAGTCGAAAGCGGCATCTT
GAGGGGGATACAGAGGATGCTGAGCCCACAAAGCACCTGGCTGTGTGTGCTGCTGTCTTG
TGAACACCGGGTGACCATGAAAAGAATGTACCTTCTTGAACTCTGCTGCCATTTCCTTTA
AATCTGTTTTTTATACTTTGTATTTCCATTATAGGAATAGTTGTTTTTCCACGATCATCA
ATATACAATTGAAAACAAATGGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATACATCGGGACTTAAAGCCAGAGAATGTTCTACTCTCATCTCAAAAAGAGGACTGTCTT
ATAAAGATTCCTGATTTTGGGCAGTCCAAGATTTTGGGAGAGACCTCTCTCATGAGAACC
TTATGTGGTACCCCCACCTACCTGGCTCCCGAGGTTCTTAATTCCTTGGGAACTGCCGGA
TATAACCGTGCTGTGGACTGCTGGAGTTTAGGAGTTATTCTTTTCATTTGCCTTAGTGGG
TATCCACCTTTCTCTGAGCATAAGAGTCAAGTGTCACTGAAGGATCAGATCACCAGTGGA
AAATACAACTTCATTCCTGGAGTCTGGGCAGAAGTCTCAGAGAAGGCTCTGGACCTTGTC
AAGAAGTTGTTGATAGTGGATCCAAAGGCACGTTTTACGACAGAAGAAGCTTTAAGACAT
CCATGGCTTCAGGATGAGGACATGAAGAGAAAATTTAAGAATTTGCTTTTTGAAGAAGAC
AAGTCCACAGCTCTGTCTCAGGTTCCAGCCCAGCCTTCTACAAGTCGAAAGCGGCATCTT
GAGGGGGATACAGAGGATGCTGAGCCCACAAAGCACCTGGCTGTGTGTGCTGCTGTCTTG
TGAACACCGGGTGACCATGAAAAGAATGTACCTTCTTGAACTCTGCTGCCATTTCCTTTA
AATCTGTTTTTTATACTTTGTATTTCCATTATAGGAATAGTTGTTTTTCCACGATCATCA
ATATACAATTGAAAACAAATGGAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61842011|ref|XP_597099.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61842011|ref|XP_597099.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               507-735, gnl|bosTau2|chr9 (37716132-37716362)
               

               
               507-735, gnl|Hg17|chr2 (91573423-91573653)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               507-735, gnl|bosTau2|chr9 (37716132-37716362)
               

               
               507-735, gnl|Hg17|chr2 (91573423-91573653)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               thg (0.253582)
               

               
               cbe (0.239234)
               

               
               ill (0.175593)
               

               
               jej (0.0989218)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.253582)
               

               
               cbe (0.239234)
               

               
               ill (0.175593)
               

               
               jej (0.0989218)

	507-735, gnl\|bosTau2\|chr9 (37716132-37716362)
	507-735, gnl\|Hg17\|chr2 (91573423-91573653)