Ss1.1-rcbe17_c8.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTGCAGAGGTCTCAGAGTTATAGTATTATATTTTAACCGTGCTAACTTGTCAAGTGCAGA CTTTACTCCCGTTTGTACGTGGTGTTATTATTGAAATGTATTGTTTGAGCTCAAAAGGCC CACCAACCCCTTCGGGCTGATATATATATATTTATTTGTAGGTATTTATATATTGAAATA TAAAAACCTAGATTTATGGAGTTTCCTCTAGATCATGTTATATTCTATATCAAACAAACT ATTTTCTGTTGACCTTTCTACCCGTTCATTCAGTATTTCGGTTTATTTCATTTCTTCTCC TTCCAGGAACTGCAATACCAGTAACCTTGGTATATATTTTTTGATACTGTACACATGGAT GTGTTGTTTCTATGTGCAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTGCAGAGGTCTCAGAGTTATAGTATTATATTTTAACCGTGCTAACTTGTCAAGTGCAGA CTTTACTCCCGTTTGTACGTGGTGTTATTATTGAAATGTATTGTTTGAGCTCAAAAGGCC CACCAACCCCTTCGGGCTGATATATATATATTTATTTGTAGGTATTTATATATTGAAATA TAAAAACCTAGATTTATGGAGTTTCCTCTAGATCATGTTATATTCTATATCAAACAAACT ATTTTCTGTTGACCTTTCTACCCGTTCATTCAGTATTTCGGTTTATTTCATTTCTTCTCC TTCCAGGAACTGCAATACCAGTAACCTTGGTATATATTTTTTGATACTGTACACATGGAT GTGTTGTTTCTATGTGCAAAAAAA |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 83-230, - strand, RNAz p=0.938515 | |
| 269-378, + strand, RNAz p=0.758485 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 83-230, - strand, RNAz p=0.938515 | |
| 269-378, + strand, RNAz p=0.758485 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of BC014967, + |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 3-384, gnl|bosTau2|chr19 (46977216-46976836) | |
| 3-384, gnl|Hg17|chr17 (75422074-75421679) | |
| 3-384, gnl|Mm7|chr11 (119189710-119189328) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-384, gnl|bosTau2|chr19 (46977216-46976836) | |
| 3-384, gnl|Hg17|chr17 (75422074-75421679) | |
| 3-384, gnl|Mm7|chr11 (119189710-119189328) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| cbe (0.239234) | |
| gul (0.177588) | |
| lyg (0.133103) | |
| kid (0.129735) | |
| thg (0.126791) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbe (0.239234) | |
| gul (0.177588) | |
| lyg (0.133103) | |
| kid (0.129735) | |
| thg (0.126791) |