Non-Coding RNA Search

Ss1.1-rcbe22_g17.5

Sequence:


               
               GTATACGTATGCAAAGTAGAAACAGACTCATAGATACAGAAAATAAACTTTTAGTTACCC
AAGGGGAGAGGAAAGGAGGGAGGGACAAATTAAGGGCATGGGATTAACATATACAAAAAA
GTACTATGTATAAATAGATAAGCAACAAGGATATACTGTATAGCATGGGGGAATTATAGA
CATTATTTTATAGTAACCTGTAATGGAGTATGATCTGCAAAAATGTTGACTCACTTATGC
TGTATACCTGAAACTAATATAGTATTGTAAATCAACTAGACAACAATAAAAAACAGAAAA
ACCAACAAGAATAAAAAGCCCTGAGATAATAAATGTTGAAAGTATATAAATGAAAATTTA
GAAAGGATAAATATAAGTAAATATATAAACATGATAATGTGCTCACCCATCATATGAAAG
GATGTCAGATTAAAGTATTATGGGAGTCTTAATCTTACTCTAGGGTTTGATTTATTTCCG
AGGCGCAGCCACAGAAACAGAGTATTTCTTGGTTGGGGAGCTGACTTCCAGAAATGGAGT
TTTTATGTTTGAAGTCTACTGTTTCCTTGGAGGTTGAACTATTATTATAATAAATTTTGA
GAGATAACAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTATACGTATGCAAAGTAGAAACAGACTCATAGATACAGAAAATAAACTTTTAGTTACCC
AAGGGGAGAGGAAAGGAGGGAGGGACAAATTAAGGGCATGGGATTAACATATACAAAAAA
GTACTATGTATAAATAGATAAGCAACAAGGATATACTGTATAGCATGGGGGAATTATAGA
CATTATTTTATAGTAACCTGTAATGGAGTATGATCTGCAAAAATGTTGACTCACTTATGC
TGTATACCTGAAACTAATATAGTATTGTAAATCAACTAGACAACAATAAAAAACAGAAAA
ACCAACAAGAATAAAAAGCCCTGAGATAATAAATGTTGAAAGTATATAAATGAAAATTTA
GAAAGGATAAATATAAGTAAATATATAAACATGATAATGTGCTCACCCATCATATGAAAG
GATGTCAGATTAAAGTATTATGGGAGTCTTAATCTTACTCTAGGGTTTGATTTATTTCCG
AGGCGCAGCCACAGAAACAGAGTATTTCTTGGTTGGGGAGCTGACTTCCAGAAATGGAGT
TTTTATGTTTGAAGTCTACTGTTTCCTTGGAGGTTGAACTATTATTATAATAAATTTTGA
GAGATAACAAAAAAAAAAAAAAAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               8-277, gnl|bosTau2|chr1 (26427950-26427689)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-277, gnl|bosTau2|chr1 (26427950-26427689)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               fce (0.543183)
               

               
               cbe (0.478469)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.543183)
               

               
               cbe (0.478469)