Non-Coding RNA Search

Ss1.1-rcbe23_l12.5

Sequence:


               
               CCGTCCGCTGAAAAAAAGCCAGACTAAGAGGGCAGCCCCTGTGAGCTCTGAATCCATAGT
GACGGAGCTGTTCCTCGTAGAACAATGACAGACTCTCAAGGGGGAGGGAGGTATTTTGGT
CTTAAGTTAGAAAGGGTGGGGCCGTGTGCACATGGCCTTTGACAGTGACAGCGCCCGTCC
TACGAGCACTCAGTAGGCACTGGAATGTCACTCCCTTCTCCACCGCACTCCATCCAGCTC
ACTCTGAGTCTGCCAACATTTTTGGAAAACTTTTGAAAAGGAATTTAGCCACAAAACATA
GCCAACCACCTTCCATTGCAAGTTTTGCAAAGCGAAGAGAGGTTCATCTCTCTCATGACT
GGTATTTAGCACAATCATAAGCGACAGTACAGTTTATATAGCGGTTTTTCCTTTATGCAT
TTCTAGAGAAGACGAAAGCTTGACCTCGTGGTATGGATAAGTTAGATTGTGTCTGACGAG
CAGTGCAATATGAAGCTGTGCAATAAAGGCCGTGCTGGTGAAGTGACTTGTTGGAAAGCT
GGACGGTTTGGGTTAGCTTCCTGCAGCGATTGCCCATGAGGCAGTCTTCCCCTGGACTGG
GAATGCAGAGTCTCTAAAGAAACCCTTTGCTCTTAGGAGGTAATTCACGTATGGTTTCTG
TTGAAATAACGGAGAATGTTAAATCTAATGGTTGTTTATGTCTTGTATAGAGAGTGTCAT
ATGTATTTAAGTTGTGTATTTTTATAAAGTAAAGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGTCCGCTGAAAAAAAGCCAGACTAAGAGGGCAGCCCCTGTGAGCTCTGAATCCATAGT
GACGGAGCTGTTCCTCGTAGAACAATGACAGACTCTCAAGGGGGAGGGAGGTATTTTGGT
CTTAAGTTAGAAAGGGTGGGGCCGTGTGCACATGGCCTTTGACAGTGACAGCGCCCGTCC
TACGAGCACTCAGTAGGCACTGGAATGTCACTCCCTTCTCCACCGCACTCCATCCAGCTC
ACTCTGAGTCTGCCAACATTTTTGGAAAACTTTTGAAAAGGAATTTAGCCACAAAACATA
GCCAACCACCTTCCATTGCAAGTTTTGCAAAGCGAAGAGAGGTTCATCTCTCTCATGACT
GGTATTTAGCACAATCATAAGCGACAGTACAGTTTATATAGCGGTTTTTCCTTTATGCAT
TTCTAGAGAAGACGAAAGCTTGACCTCGTGGTATGGATAAGTTAGATTGTGTCTGACGAG
CAGTGCAATATGAAGCTGTGCAATAAAGGCCGTGCTGGTGAAGTGACTTGTTGGAAAGCT
GGACGGTTTGGGTTAGCTTCCTGCAGCGATTGCCCATGAGGCAGTCTTCCCCTGGACTGG
GAATGCAGAGTCTCTAAAGAAACCCTTTGCTCTTAGGAGGTAATTCACGTATGGTTTCTG
TTGAAATAACGGAGAATGTTAAATCTAATGGTTGTTTATGTCTTGTATAGAGAGTGTCAT
ATGTATTTAAGTTGTGTATTTTTATAAAGTAAAGCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               15-756, gnl|bosTau2|chr11 (53658640-53657901)
               

               
               15-756, gnl|Hg17|chr2 (25078947-25078172)
               

               
               15-756, gnl|Mm7|chr12 (4028097-4028844)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               15-756, gnl|bosTau2|chr11 (53658640-53657901)
               

               
               15-756, gnl|Hg17|chr2 (25078947-25078172)
               

               
               15-756, gnl|Mm7|chr12 (4028097-4028844)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbe (0.239234)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.239234)

	15-756, gnl\|bosTau2\|chr11 (53658640-53657901)
	15-756, gnl\|Hg17\|chr2 (25078947-25078172)
	15-756, gnl\|Mm7\|chr12 (4028097-4028844)