Non-Coding RNA Search

Ss1.1-rcbl0_002221.5

Sequence:


               
               GTTAGTTTTACCCTACTGATGACACGTCGTTGCAATGGTAATCCTGCTCAGTACGAGAGG
AACCGCAGGTTCAGACATTTGGTTTATGTGCTTGGCTGATAAGCCAATGGTGCGAAGCTA
CCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCTCGCCCAAATCTGTAACGA
TACTATCTGCACCTCTGCGTTGGGAGGCAACGATAAGCGCGGACGGACCGATTCGGCGTC
CGCGATGGTAATGCCACAGAAAACGGTCATTGGTACGTCTAGAATTCAGCATAGTGCTCT
CATTCAGAAATATTCCATTTCTTTATGTAATTTAAAACTAGACGTGTTTGATAACTGTTA
GTTTACCAGTCTTTCAAGTGTTGTTTCCGTTGTAATTCCTTGTTCTCCTTCGGGGGCTTG
ACACTACCTCGGATTGGCTAAGATTCACATGGCGGGTGTCGTTGACGAAGCAGAAGACGC
TTACTCTTCCGGAACACCTGGTCTTAGTCTCCTAGACTTTTTTCTGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTAGTTTTACCCTACTGATGACACGTCGTTGCAATGGTAATCCTGCTCAGTACGAGAGG
AACCGCAGGTTCAGACATTTGGTTTATGTGCTTGGCTGATAAGCCAATGGTGCGAAGCTA
CCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCTCGCCCAAATCTGTAACGA
TACTATCTGCACCTCTGCGTTGGGAGGCAACGATAAGCGCGGACGGACCGATTCGGCGTC
CGCGATGGTAATGCCACAGAAAACGGTCATTGGTACGTCTAGAATTCAGCATAGTGCTCT
CATTCAGAAATATTCCATTTCTTTATGTAATTTAAAACTAGACGTGTTTGATAACTGTTA
GTTTACCAGTCTTTCAAGTGTTGTTTCCGTTGTAATTCCTTGTTCTCCTTCGGGGGCTTG
ACACTACCTCGGATTGGCTAAGATTCACATGGCGGGTGTCGTTGACGAAGCAGAAGACGC
TTACTCTTCCGGAACACCTGGTCTTAGTCTCCTAGACTTTTTTCTGGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-168, gnl|bosTau2|chr10 (49444988-49444824)
               

               
               2-168, gnl|Hg17|chr2 (132870414-132870257)
               

               
               2-168, gnl|Mm7|chrUn_random (8650006-8649840)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-168, gnl|bosTau2|chr10 (49444988-49444824)
               

               
               2-168, gnl|Hg17|chr2 (132870414-132870257)
               

               
               2-168, gnl|Mm7|chrUn_random (8650006-8649840)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.229595)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.229595)

	2-168, gnl\|bosTau2\|chr10 (49444988-49444824)
	2-168, gnl\|Hg17\|chr2 (132870414-132870257)
	2-168, gnl\|Mm7\|chrUn_random (8650006-8649840)