Non-Coding RNA Search

Ss1.1-rcbl0_002410.5.5

Sequence:


               
               ATGACCGTGTTCACGTTCTTACCACACTCTTTTGATCATTGTAGGATTATAGTAAGCCTT
GAAATCAGGAAGGGTGAATACTCCAGCTTTGTTCTATTTTTCTTTTTCTTTTTAAATTTT
ATCTTTATTAAATGTCGTGCCAATTTCTGTTGTACAGCAAAGTGCCCCAGTCCCACACAC
ACACACACACACACACACACACACGTTCTTTTTCGTATGTTATCATCTTCCATCATGTTC
TATCCCAAGAAGTCGCATATAGTTCCCTGTGCTGGACAGCAGGACCTCATTGCTTATTTA
TTCTAAATGCAATAGTTTGCATCTACTAACCCCCAACTCCCTGTCCAGCCCACTCCTTCC
CCCTCCCTTTTGGCAACCACAAGTCTGTTCTCTATGAGTCTGCTTCTGTTCATTTGTGCC
ATATTTTAGATTCCACGTATAAGAGATATCATATGGTATTGGTCGTTCTCTTTCTGACTC
ACTACACTTAGTATGAGACTCTCTAGTTTCATCTATGTTGCTGCAAATGGCATTATTTCA
TGGTTTTTTATGGCTGAGTATCTTTCTTTATGGTTGTTTCATTGGTTATTTGGGGTTCCT
TGAAATCCCATGTGAATTTTTTATATGGATTTTAGGATGGGTAAAATGTCATTGGGATTT
TGATAGAAACTGCACTGACTCCTTTTAGGTCACGTTGGGTGCTGTTTGCACCTTAACAAT
ATTGGGTCTTTCAATCCATGAACATAGGATGTCTTTCCATTTATCTGTGTCTCTTTAATT
TCTTCTGGCAATCCATGTTTTGTAGTTTTCAGTGTTTGAGACTTTCAGTTCCCTAGTTAA
TTAGCAAGTATTTTATTCTTTTTGATGTTATTATAAATGGAATTATTTTCTTAATTTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGACCGTGTTCACGTTCTTACCACACTCTTTTGATCATTGTAGGATTATAGTAAGCCTT
GAAATCAGGAAGGGTGAATACTCCAGCTTTGTTCTATTTTTCTTTTTCTTTTTAAATTTT
ATCTTTATTAAATGTCGTGCCAATTTCTGTTGTACAGCAAAGTGCCCCAGTCCCACACAC
ACACACACACACACACACACACACGTTCTTTTTCGTATGTTATCATCTTCCATCATGTTC
TATCCCAAGAAGTCGCATATAGTTCCCTGTGCTGGACAGCAGGACCTCATTGCTTATTTA
TTCTAAATGCAATAGTTTGCATCTACTAACCCCCAACTCCCTGTCCAGCCCACTCCTTCC
CCCTCCCTTTTGGCAACCACAAGTCTGTTCTCTATGAGTCTGCTTCTGTTCATTTGTGCC
ATATTTTAGATTCCACGTATAAGAGATATCATATGGTATTGGTCGTTCTCTTTCTGACTC
ACTACACTTAGTATGAGACTCTCTAGTTTCATCTATGTTGCTGCAAATGGCATTATTTCA
TGGTTTTTTATGGCTGAGTATCTTTCTTTATGGTTGTTTCATTGGTTATTTGGGGTTCCT
TGAAATCCCATGTGAATTTTTTATATGGATTTTAGGATGGGTAAAATGTCATTGGGATTT
TGATAGAAACTGCACTGACTCCTTTTAGGTCACGTTGGGTGCTGTTTGCACCTTAACAAT
ATTGGGTCTTTCAATCCATGAACATAGGATGTCTTTCCATTTATCTGTGTCTCTTTAATT
TCTTCTGGCAATCCATGTTTTGTAGTTTTCAGTGTTTGAGACTTTCAGTTCCCTAGTTAA
TTAGCAAGTATTTTATTCTTTTTGATGTTATTATAAATGGAATTATTTTCTTAATTTCCT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               87-560, gnl|bosTau2|chr1 (52995275-52994784)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               87-560, gnl|bosTau2|chr1 (52995275-52994784)

Expressed library(ies): 7 entry(ies)

More info

Expressed library(ies): 7 entry(ies)

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               cbl (0.918379)
               

               
               cty (0.31224)
               

               
               lin (0.291206)
               

               
               thg (0.253582)
               

               
               sin (0.174948)
               

               
               liv (0.146284)
               

               
               spl (0.143184)

Expressed library(ies): 7 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.918379)
               

               
               cty (0.31224)
               

               
               lin (0.291206)
               

               
               thg (0.253582)
               

               
               sin (0.174948)
               

               
               liv (0.146284)
               

               
               spl (0.143184)

	cbl (0.918379)
	cty (0.31224)
	lin (0.291206)
	thg (0.253582)
	sin (0.174948)
	liv (0.146284)
	spl (0.143184)