Ss1.1-rcbl0_004271.5
|
TAAATAGTAGTGAAACATCAGACCTTTTGAAAGAGAAAGATGAGCAGATCCGAGGGTTAA
TGGAAGAAGGAGGAAAACTTTCAAACCAGCAGCTGCATAATTCTAACATCATTAAGAAAT
TAAGAGCTAAAGCCAAGAAAATGAAAATATTATTGCAAAGCTGACCAAAAAAGTTAAAGA
GCTAGAAGAAGAAGTTACAACACTTAAAACAGGTCCTTGATGGCAAAGAAGAGGTTGAGA
AGCAACACAGAGACAATATTAAGAAACTTAATTCTGTGGTAGAACGCCAAGAGAAGGATC
TTGGCCGACTTCAATTAGACATGAATGAACTTGAAGAAAAGAACCGAAGTATTCAGGCTG
CTCTTGACAGTGCATATAAGGAACTTACTGATCTCCACAAAGCCAATGCTGCAAAGGATA
GTGAAGCCCAGGAAGCTGCTCTGAGTCGTGAAATGAGAGCTAAAGAAGAACTTTCTGCAG
CACTGGAGAAGGCCCAAGAAGAAGCCCGTCAGCAGCAAGAAACATTAGCAATTCAAGTGG
GTGACCTTAGGCTGGCATTGCAACGTGCGGAACAAGCAGCTGCCAGAAAAGAGGATTATT
TGCGCCATGAGATCAGTGAACTCCAGCAGAGACTCCAGGAAGCAGAGAATCGAAACCAAG
AACTGAGTCAAAGTGTTTCATCAACAACAAGACCATTGCTTCGACAGATAGAAAATTTGC
AAGCAACACTAGGGTCCCAGACGTCGTCATGGGAGAAGTTAGAGAAGAATCTTTCTGATA
GACTTGGTGAATCCCAGACCTTGTTGGCAGCAGCAGTTGAGAGAGAACGTGCAGCTACAG
AAGAACTTCTTGCCAACAAAGTTCAAATGTCTTCTATGGAGTCACAGAATTCTCTCTTAA
GACAAGAAAACAGTAGATTTCAGGCCCAGCTTGAAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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TAAATAGTAGTGAAACATCAGACCTTTTGAAAGAGAAAGATGAGCAGATCCGAGGGTTAA
TGGAAGAAGGAGGAAAACTTTCAAACCAGCAGCTGCATAATTCTAACATCATTAAGAAAT
TAAGAGCTAAAGCCAAGAAAATGAAAATATTATTGCAAAGCTGACCAAAAAAGTTAAAGA
GCTAGAAGAAGAAGTTACAACACTTAAAACAGGTCCTTGATGGCAAAGAAGAGGTTGAGA
AGCAACACAGAGACAATATTAAGAAACTTAATTCTGTGGTAGAACGCCAAGAGAAGGATC
TTGGCCGACTTCAATTAGACATGAATGAACTTGAAGAAAAGAACCGAAGTATTCAGGCTG
CTCTTGACAGTGCATATAAGGAACTTACTGATCTCCACAAAGCCAATGCTGCAAAGGATA
GTGAAGCCCAGGAAGCTGCTCTGAGTCGTGAAATGAGAGCTAAAGAAGAACTTTCTGCAG
CACTGGAGAAGGCCCAAGAAGAAGCCCGTCAGCAGCAAGAAACATTAGCAATTCAAGTGG
GTGACCTTAGGCTGGCATTGCAACGTGCGGAACAAGCAGCTGCCAGAAAAGAGGATTATT
TGCGCCATGAGATCAGTGAACTCCAGCAGAGACTCCAGGAAGCAGAGAATCGAAACCAAG
AACTGAGTCAAAGTGTTTCATCAACAACAAGACCATTGCTTCGACAGATAGAAAATTTGC
AAGCAACACTAGGGTCCCAGACGTCGTCATGGGAGAAGTTAGAGAAGAATCTTTCTGATA
GACTTGGTGAATCCCAGACCTTGTTGGCAGCAGCAGTTGAGAGAGAACGTGCAGCTACAG
AAGAACTTCTTGCCAACAAAGTTCAAATGTCTTCTATGGAGTCACAGAATTCTCTCTTAA
GACAAGAAAACAGTAGATTTCAGGCCCAGCTTGAAT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
68-214, gnl|bosTau2|chr22 (23008280-23008426) |
|
68-214, gnl|canFam2|chr20 (25696859-25696711) |
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68-214, gnl|danRer3|chr11 (17353566-17353714) |
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68-214, gnl|dasNov1|scaffold_31168 (6322-6174) |
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68-214, gnl|echTel1|scaffold_180254 (1225-1077) |
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68-214, gnl|fr1|chrUn (169510068-169510204) |
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68-214, gnl|galGal2|chrUn (128165702-128165850) |
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68-214, gnl|hg17|chr3 (69171389-69171537) |
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68-214, gnl|Hg17|chr3 (69171536-69171390) |
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68-214, gnl|loxAfr1|scaffold_95066 (1393-1245) |
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68-214, gnl|mm7|chr6 (97256826-97256974) |
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68-214, gnl|Mm7|chr6 (97256973-97256827) |
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68-214, gnl|monDom2|scaffold_5 (16353480-16353628) |
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68-214, gnl|oryCun1|scaffold_183427 (6105-5959) |
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68-214, gnl|panTro1|chr2 (70957547-70957695) |
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68-214, gnl|rheMac2|chr2 (67113626-67113478) |
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68-214, gnl|rn3|chr4 (132133514-132133662) |
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68-214, gnl|tetNig1|chr11 (1232753-1232605) |
|
68-214, gnl|xenTro1|scaffold_740 (303211-303357) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
68-214, gnl|bosTau2|chr22 (23008280-23008426) |
|
68-214, gnl|canFam2|chr20 (25696859-25696711) |
|
68-214, gnl|danRer3|chr11 (17353566-17353714) |
|
68-214, gnl|dasNov1|scaffold_31168 (6322-6174) |
|
68-214, gnl|echTel1|scaffold_180254 (1225-1077) |
|
68-214, gnl|fr1|chrUn (169510068-169510204) |
|
68-214, gnl|galGal2|chrUn (128165702-128165850) |
|
68-214, gnl|hg17|chr3 (69171389-69171537) |
|
68-214, gnl|Hg17|chr3 (69171536-69171390) |
|
68-214, gnl|loxAfr1|scaffold_95066 (1393-1245) |
|
68-214, gnl|mm7|chr6 (97256826-97256974) |
|
68-214, gnl|Mm7|chr6 (97256973-97256827) |
|
68-214, gnl|monDom2|scaffold_5 (16353480-16353628) |
|
68-214, gnl|oryCun1|scaffold_183427 (6105-5959) |
|
68-214, gnl|panTro1|chr2 (70957547-70957695) |
|
68-214, gnl|rheMac2|chr2 (67113626-67113478) |
|
68-214, gnl|rn3|chr4 (132133514-132133662) |
|
68-214, gnl|tetNig1|chr11 (1232753-1232605) |
|
68-214, gnl|xenTro1|scaffold_740 (303211-303357) |
|
cbl (0.344392) |
|
cte (0.29274) |
|
ova (0.129132) |
|
cbl (0.344392) |
|
cte (0.29274) |
|
ova (0.129132) |
