Non-Coding RNA Search

Ss1.1-rcbl0_005067.5

Sequence:


               
               ATTGAATTGAAGGCCCCTCCCTATCATCAAGGAGAATCCCATCCAAAATGTAATGAGGCA
ACCCTGCGGTCAATTCTTCAGTATCAGTCCAACCCCTCCAATCACATGACCTCCAAACAA
TACACTGGAAATTCCAACACGCCTGGAGGGCTCCCAGGGCAAGCTTATATCCAGAAAACA
ATGCAGCCAGACCAGAGGCCACAAAGGTATCATGTTGAGATGAATCAAGGACAGTCTCAA
GGTACAGTGGACCAGCATCTCCAGTTCCAAAAACCCTCACTCCAGGTGCACTTCTCCAAA
ACAGACCCTTCACCTGAAGCTCATAGGCAGTCACTGTGTGCCCCGAGATTTCATTTTCAG
CAGAGACCAGATCCCCAAACTGAGAAGCTCATACCCCTGACATTAAAACAGCACTTGAAT
CAACAGGCTTCAGAGACCGAGCCATTCTCAAATTCGAACCTTTTGCAACAGAAGCCTCAT
AAGGAGGCGGCACAAACGCTACCATCCCAGAATTCACATCTCTCTCAGAGTCAGCAACAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTGAATTGAAGGCCCCTCCCTATCATCAAGGAGAATCCCATCCAAAATGTAATGAGGCA
ACCCTGCGGTCAATTCTTCAGTATCAGTCCAACCCCTCCAATCACATGACCTCCAAACAA
TACACTGGAAATTCCAACACGCCTGGAGGGCTCCCAGGGCAAGCTTATATCCAGAAAACA
ATGCAGCCAGACCAGAGGCCACAAAGGTATCATGTTGAGATGAATCAAGGACAGTCTCAA
GGTACAGTGGACCAGCATCTCCAGTTCCAAAAACCCTCACTCCAGGTGCACTTCTCCAAA
ACAGACCCTTCACCTGAAGCTCATAGGCAGTCACTGTGTGCCCCGAGATTTCATTTTCAG
CAGAGACCAGATCCCCAAACTGAGAAGCTCATACCCCTGACATTAAAACAGCACTTGAAT
CAACAGGCTTCAGAGACCGAGCCATTCTCAAATTCGAACCTTTTGCAACAGAAGCCTCAT
AAGGAGGCGGCACAAACGCTACCATCCCAGAATTCACATCTCTCTCAGAGTCAGCAACAG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-540, gnl|bosTau2|chr6 (6106895-6107434)
               

               
               1-540, gnl|Hg17|chr4 (106514396-106514935)
               

               
               1-540, gnl|Mm7|chr3 (133284028-133283513)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-540, gnl|bosTau2|chr6 (6106895-6107434)
               

               
               1-540, gnl|Hg17|chr4 (106514396-106514935)
               

               
               1-540, gnl|Mm7|chr3 (133284028-133283513)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.229595)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.229595)

	1-540, gnl\|bosTau2\|chr6 (6106895-6107434)
	1-540, gnl\|Hg17\|chr4 (106514396-106514935)
	1-540, gnl\|Mm7\|chr3 (133284028-133283513)