Non-Coding RNA Search

Ss1.1-rcbl0_006015.5

Sequence:


               
               CACAACTGCAGCTCAGATCTGATCCCTGGCCTGGGAACTCCATATGCCACGGAGCAGCCA
AAAAAGAAAACAAACAGACAAAAAAACCAAGAAAGGTTGGGGGCCCTGCATCATCACCAA
GTGCCTCCCATTGGTGTGGGATCCATAGCAGGCTGGCCACAACCTCAGCCCCTTTATTAT
GGGAATGTAAATGGACCTCTTCTATTCTTGCCTGAGTATTCTTTGTCTCTGAATTATTTT
CACTGCCTTTGAATAACCTCTTCAATATTCTTGCAGTTATATTCCCTGCTCAGAGAGGAT
ACACGTAGCTGTTACAGAAATGGCAGCATTATTCCCCAAAGTAAGTCACTCCCTACTAAC
TTGGTTCAAATCCATTTTAATGAATTGCAAATTTCTTTATGACCTTTATATTATATTCAT
CTCTTTGTAGCACAGAGGGTTTTAAATATACATACAGCCATAGAGGGCTTTGAATTATTT
TTGTTCTACATGAGTATTGGTTTGGGTTTAATAAGACAAGAAAGTACAAACCATTAATAG
AATAAAATTTTATCAGGAATATTTCGCCCAAGTGGCCGAATATTTTTCAAAAACTACAAT
AGCACTCCTGAATGTGCACTGCTAACTTCACTGCTTGCGCTTTGACCTTTGAGTCAGAGA
ACGTCAGCATCCGCCATGCTGTGGGTTGCCAAGCTCTCTGTTGCCAAGCTCTCAGTATGC
CCAGCACCCCCAGTGACAAAGTGCACAACAAAACTGCCAGTCACTGTGGAACAGCTCGAG
TTGTTTTCCGAAGAGTGCCTGTCCCTGCTCTCGGATGTGCCTGCCCCACAGTTCATGAGG
AACGGCTGTGTTTTTCTGTTTAGAAACCCAAGTCTGACATGGTGAGGACTTCCCTCCGCT
TACTGACATCCAGTGCCTACCGACTCCAGTCGGAGTGCAAGAAGACCCTCCCGGGGGACC
CAGGCCCGCCCACGGACATTCAGCTGGTCACGCAGCAGGTCATCCAGTGTGCGTACGACA
TCGCCAAGGCCGCCAAACAGCTGGTCACCATCACCACCAAAGAGAACAACAACTGAACTG
CGGGGCTGGCCCTTCTGTTTTCTAGGCTTTTCCAAGTCCGGTTTCCAGTTTAGACATGGA
ACTCTTCTGATTTTTACAGAAACAAACATTTAATGACGTTTAAAACTTTTTAAAAGAAAA
CTCAGTATTATTTTTGCATGTTTTCTAACAAATTTTCAACTATTAATTTAACCCACTTGC
CTTATTTTGTGCCTGTTTGCCCATTGACTTTCTGACATATTCTCTTGTGCTGTCCATGAC
CATCGTGTTGCTGATCCTAGATGTTCAAAAGTATAGCTTCATTGTTAAAAGTTGGTTAGA
ACTTTTCCTTGCCTTCAGGCTCCTTGCCTCTGGCTAAAACTTTAAGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACAACTGCAGCTCAGATCTGATCCCTGGCCTGGGAACTCCATATGCCACGGAGCAGCCA
AAAAAGAAAACAAACAGACAAAAAAACCAAGAAAGGTTGGGGGCCCTGCATCATCACCAA
GTGCCTCCCATTGGTGTGGGATCCATAGCAGGCTGGCCACAACCTCAGCCCCTTTATTAT
GGGAATGTAAATGGACCTCTTCTATTCTTGCCTGAGTATTCTTTGTCTCTGAATTATTTT
CACTGCCTTTGAATAACCTCTTCAATATTCTTGCAGTTATATTCCCTGCTCAGAGAGGAT
ACACGTAGCTGTTACAGAAATGGCAGCATTATTCCCCAAAGTAAGTCACTCCCTACTAAC
TTGGTTCAAATCCATTTTAATGAATTGCAAATTTCTTTATGACCTTTATATTATATTCAT
CTCTTTGTAGCACAGAGGGTTTTAAATATACATACAGCCATAGAGGGCTTTGAATTATTT
TTGTTCTACATGAGTATTGGTTTGGGTTTAATAAGACAAGAAAGTACAAACCATTAATAG
AATAAAATTTTATCAGGAATATTTCGCCCAAGTGGCCGAATATTTTTCAAAAACTACAAT
AGCACTCCTGAATGTGCACTGCTAACTTCACTGCTTGCGCTTTGACCTTTGAGTCAGAGA
ACGTCAGCATCCGCCATGCTGTGGGTTGCCAAGCTCTCTGTTGCCAAGCTCTCAGTATGC
CCAGCACCCCCAGTGACAAAGTGCACAACAAAACTGCCAGTCACTGTGGAACAGCTCGAG
TTGTTTTCCGAAGAGTGCCTGTCCCTGCTCTCGGATGTGCCTGCCCCACAGTTCATGAGG
AACGGCTGTGTTTTTCTGTTTAGAAACCCAAGTCTGACATGGTGAGGACTTCCCTCCGCT
TACTGACATCCAGTGCCTACCGACTCCAGTCGGAGTGCAAGAAGACCCTCCCGGGGGACC
CAGGCCCGCCCACGGACATTCAGCTGGTCACGCAGCAGGTCATCCAGTGTGCGTACGACA
TCGCCAAGGCCGCCAAACAGCTGGTCACCATCACCACCAAAGAGAACAACAACTGAACTG
CGGGGCTGGCCCTTCTGTTTTCTAGGCTTTTCCAAGTCCGGTTTCCAGTTTAGACATGGA
ACTCTTCTGATTTTTACAGAAACAAACATTTAATGACGTTTAAAACTTTTTAAAAGAAAA
CTCAGTATTATTTTTGCATGTTTTCTAACAAATTTTCAACTATTAATTTAACCCACTTGC
CTTATTTTGTGCCTGTTTGCCCATTGACTTTCTGACATATTCTCTTGTGCTGTCCATGAC
CATCGTGTTGCTGATCCTAGATGTTCAAAAGTATAGCTTCATTGTTAAAAGTTGGTTAGA
ACTTTTCCTTGCCTTCAGGCTCCTTGCCTCTGGCTAAAACTTTAAGTG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|61834853|ref|XP_603224.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|61834853|ref|XP_603224.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               205-1428, gnl|bosTau2|chr17 (35949164-35947967)
               

               
               205-1428, gnl|Hg17|chr12 (108834711-108833155)
               

               
               205-1428, gnl|Mm7|chr5 (113951943-113950711)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               205-1428, gnl|bosTau2|chr17 (35949164-35947967)
               

               
               205-1428, gnl|Hg17|chr12 (108834711-108833155)
               

               
               205-1428, gnl|Mm7|chr5 (113951943-113950711)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cbl (0.344392)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.344392)

	205-1428, gnl\|bosTau2\|chr17 (35949164-35947967)
	205-1428, gnl\|Hg17\|chr12 (108834711-108833155)
	205-1428, gnl\|Mm7\|chr5 (113951943-113950711)