Non-Coding RNA Search

Ss1.1-rcbl0_006610.5

Sequence:


               
               TTCCTTTAATTGCTTCACTTAAAAAAAAAAAAAAAATGGGTCCACTGTTATACCAAACAT
ATATATATATGTGCAGCTTTACATTTTGTTTTACATGAAGCACGTGATTAGGAAAACTCG
TTTTCTCAAGCCTCAGGGCCTATCTGAAGAGAAGTTCCTTTTTTTTTTTTTTAAGCTCAA
GTTGTGCATGAATTACTGAACTTTTTCTCTGCTTTTTTTTGTAAAACATACTTTGGTACT
CTTCACTGAAAGTTGAAAACATTTCTCATTAATCCCCTTTTGTGCCTTTTTTTAATTTTG
CCAACCATGTTTATAGACAGGACATTACTAATGACATTTTGTGAATTAAAACATATTCAT
TGGAATGTGACAGTCCCCTAAAAATCCAACTCTACAGAAACTTTGCTGTCTTATTTGTTG
TAATTTTAATAATAGGAACACAAAGTCAAGAAGGAAACATGTATATCTGCAAAGGGTCAT
GGAGACTGTTGGAATGTGACCAAGTGTGGGTCTAGTGGGCTACTGCTCGTCTTGGTTCAT
AATAGCTCTTGAGACCTGACACTGGGAGTGACCAGAAGTGGTCTGTAGGCCTTATTTGTG
ATTACACACTGTCCCCTGCTAGGAAAAAAATTAGTAAAGAACTGAGAAACTTGAAGAAAA
AAAAACAAAAATGGAATGCCTATAATGCCATAGTGCTATTTGGTAGAGTCTAACCTTAAA
AACATGAGTTGCTTGGCAGATGCCTTTTCGGTAGGTGTTTCCTTGTTTGCCTTCTGTGAA
CATGCAGTCATACGGAATGGAAAGAAAAAAAAGACTCAAATTACTGCTTATAAAGAAATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCCTTTAATTGCTTCACTTAAAAAAAAAAAAAAAATGGGTCCACTGTTATACCAAACAT
ATATATATATGTGCAGCTTTACATTTTGTTTTACATGAAGCACGTGATTAGGAAAACTCG
TTTTCTCAAGCCTCAGGGCCTATCTGAAGAGAAGTTCCTTTTTTTTTTTTTTAAGCTCAA
GTTGTGCATGAATTACTGAACTTTTTCTCTGCTTTTTTTTGTAAAACATACTTTGGTACT
CTTCACTGAAAGTTGAAAACATTTCTCATTAATCCCCTTTTGTGCCTTTTTTTAATTTTG
CCAACCATGTTTATAGACAGGACATTACTAATGACATTTTGTGAATTAAAACATATTCAT
TGGAATGTGACAGTCCCCTAAAAATCCAACTCTACAGAAACTTTGCTGTCTTATTTGTTG
TAATTTTAATAATAGGAACACAAAGTCAAGAAGGAAACATGTATATCTGCAAAGGGTCAT
GGAGACTGTTGGAATGTGACCAAGTGTGGGTCTAGTGGGCTACTGCTCGTCTTGGTTCAT
AATAGCTCTTGAGACCTGACACTGGGAGTGACCAGAAGTGGTCTGTAGGCCTTATTTGTG
ATTACACACTGTCCCCTGCTAGGAAAAAAATTAGTAAAGAACTGAGAAACTTGAAGAAAA
AAAAACAAAAATGGAATGCCTATAATGCCATAGTGCTATTTGGTAGAGTCTAACCTTAAA
AACATGAGTTGCTTGGCAGATGCCTTTTCGGTAGGTGTTTCCTTGTTTGCCTTCTGTGAA
CATGCAGTCATACGGAATGGAAAGAAAAAAAAGACTCAAATTACTGCTTATAAAGAAATA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               5-840, gnl|bosTau2|chr18 (162036-162876)
               

               
               5-840, gnl|Hg17|chr8 (66678946-66678101)
               

               
               5-840, gnl|Mm7|chr3 (18865823-18864994)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-840, gnl|bosTau2|chr18 (162036-162876)
               

               
               5-840, gnl|Hg17|chr8 (66678946-66678101)
               

               
               5-840, gnl|Mm7|chr3 (18865823-18864994)

Expressed library(ies): 6 entry(ies)

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Expressed library(ies): 6 entry(ies)

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               cbl (0.45919)
               

               
               fty (0.17584)
               

               
               sug (0.127291)
               

               
               med (0.116252)
               

               
               jej (0.0989218)
               

               
               eje (0.0988338)

Expressed library(ies): 6 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.45919)
               

               
               fty (0.17584)
               

               
               sug (0.127291)
               

               
               med (0.116252)
               

               
               jej (0.0989218)
               

               
               eje (0.0988338)

	5-840, gnl\|bosTau2\|chr18 (162036-162876)
	5-840, gnl\|Hg17\|chr8 (66678946-66678101)
	5-840, gnl\|Mm7\|chr3 (18865823-18864994)

	cbl (0.45919)
	fty (0.17584)
	sug (0.127291)
	med (0.116252)
	jej (0.0989218)
	eje (0.0988338)