Ss1.1-rcbl0_008385.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AACGAGCTTTTGCCATCGACAGTAATAACCCATGGTTACATGAATGTTTAATTAAATTTT CTAAGTCTGTGTCTAATCATAGTAATCTTCCAGACATTGTGAGCCAAGTTCTGTCTCAAG AAATGCAGAAAATATTTGTCAACAAGGATGTGGAAAGTTTTAATGAGGATTTTCTCAAAC GCAATGCTACCTCCCTTCAGCATCTCCTTTCAGGTGCTAAGATGATGTATTTTCTGGACA AGTCAAGGCAAGAGAAAGCCATTGCTATTGCCACCAGACTGGATGAAACCATAAGAGATA AAAATGTAAAGACTTTAATAAAGGTTTCTGAGGCACTGCTTGATGGCAGCTTTGGGAACT GTACTTCGCAATATGAGGAATACAGGGTGGCCTGTCACAACCTGCTGCCTTTTACGTCTG CTTTCCTGCCTGCTGTGAGTGAAGTCCACGGTCACGGTGCAGCCCGAAACCTCACAGCTA ACTCTGATGTCTTGGCAAATGAAATTGGAAATCTCGCAGAAAGCTGACTCCTGTAAGACT CAAATCAGGGTTTCTTTTCCAGCTTGTCTTTTATTATGGGTATGAAAGGAAATACAGCTG ACCCTTGAACAACATGGGTTTGAATTGTGAGGGTCCATTTATTTGCGGATTCTTTTGAGA CCGTGTGGAGAGTTGGTGTACCTAACTCTTGCTTTGTTCAGCGATCAACTCTAATTGGAT AGAATTTTTTTTTTTTTTTTTTTTAACTTTTGGCCACCCCATGACATATGGAAATCCCAG GCCAGGGATCAGATGCAAGCCGCAGTTGCAGCAGGGCCGGATCCTTTAACCCACTTTGCC AGGCTGGGGATCGAACCTATGTCCTGCCACTGCAGAGACGCTGCTGGTCCCCGAGCGCCC ACTGTGAGCACTCTGGATAGAATTTTTAAACAAAGTATTCTGTAAGCTTATTCTTTATCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AACGAGCTTTTGCCATCGACAGTAATAACCCATGGTTACATGAATGTTTAATTAAATTTT CTAAGTCTGTGTCTAATCATAGTAATCTTCCAGACATTGTGAGCCAAGTTCTGTCTCAAG AAATGCAGAAAATATTTGTCAACAAGGATGTGGAAAGTTTTAATGAGGATTTTCTCAAAC GCAATGCTACCTCCCTTCAGCATCTCCTTTCAGGTGCTAAGATGATGTATTTTCTGGACA AGTCAAGGCAAGAGAAAGCCATTGCTATTGCCACCAGACTGGATGAAACCATAAGAGATA AAAATGTAAAGACTTTAATAAAGGTTTCTGAGGCACTGCTTGATGGCAGCTTTGGGAACT GTACTTCGCAATATGAGGAATACAGGGTGGCCTGTCACAACCTGCTGCCTTTTACGTCTG CTTTCCTGCCTGCTGTGAGTGAAGTCCACGGTCACGGTGCAGCCCGAAACCTCACAGCTA ACTCTGATGTCTTGGCAAATGAAATTGGAAATCTCGCAGAAAGCTGACTCCTGTAAGACT CAAATCAGGGTTTCTTTTCCAGCTTGTCTTTTATTATGGGTATGAAAGGAAATACAGCTG ACCCTTGAACAACATGGGTTTGAATTGTGAGGGTCCATTTATTTGCGGATTCTTTTGAGA CCGTGTGGAGAGTTGGTGTACCTAACTCTTGCTTTGTTCAGCGATCAACTCTAATTGGAT AGAATTTTTTTTTTTTTTTTTTTTAACTTTTGGCCACCCCATGACATATGGAAATCCCAG GCCAGGGATCAGATGCAAGCCGCAGTTGCAGCAGGGCCGGATCCTTTAACCCACTTTGCC AGGCTGGGGATCGAACCTATGTCCTGCCACTGCAGAGACGCTGCTGGTCCCCGAGCGCCC ACTGTGAGCACTCTGGATAGAATTTTTAAACAAAGTATTCTGTAAGCTTATTCTTTATCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 69-215, gnl|bosTau2|chr12 (4680497-4680643) | |
| 69-215, gnl|canFam2|chr22 (12195388-12195218) | |
| 69-215, gnl|danRer3|chrUn (121719548-121719721) | |
| 69-215, gnl|dasNov1|scaffold_9379 (91422-91592) | |
| 69-215, gnl|echTel1|scaffold_279796 (44868-44698) | |
| 69-215, gnl|galGal2|chr1 (158116472-158116630) | |
| 69-215, gnl|hg17|chr13 (40845755-40845926) | |
| 69-215, gnl|Hg17|chr13 (40845772-40845918) | |
| 69-215, gnl|loxAfr1|scaffold_5344 (29404-29575) | |
| 69-215, gnl|mm7|chr14 (74020386-74020215) | |
| 69-215, gnl|Mm7|chr14 (74020367-74020221) | |
| 69-215, gnl|monDom2|scaffold_64 (2969843-2970005) | |
| 69-215, gnl|oryCun1|scaffold_133656 (210-379) | |
| 69-215, gnl|panTro1|chr14 (40559711-40559878) | |
| 69-215, gnl|rheMac2|chr17 (20382894-20383065) | |
| 69-215, gnl|rn3|chr2 (140315841-140315994) | |
| 69-215, gnl|tetNig1|chrUn_random (97269061-97268891) | |
| 69-215, gnl|xenTro1|scaffold_381 (347304-347475) | |
| 310-655, gnl|bosTau2|chr12 (4683376-4683734) | |
| 310-655, gnl|Hg17|chr13 (40847539-40847850) | |
| 310-655, gnl|Mm7|chr14 (74016622-74016296) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 69-215, gnl|bosTau2|chr12 (4680497-4680643) | |
| 69-215, gnl|canFam2|chr22 (12195388-12195218) | |
| 69-215, gnl|danRer3|chrUn (121719548-121719721) | |
| 69-215, gnl|dasNov1|scaffold_9379 (91422-91592) | |
| 69-215, gnl|echTel1|scaffold_279796 (44868-44698) | |
| 69-215, gnl|galGal2|chr1 (158116472-158116630) | |
| 69-215, gnl|hg17|chr13 (40845755-40845926) | |
| 69-215, gnl|Hg17|chr13 (40845772-40845918) | |
| 69-215, gnl|loxAfr1|scaffold_5344 (29404-29575) | |
| 69-215, gnl|mm7|chr14 (74020386-74020215) | |
| 69-215, gnl|Mm7|chr14 (74020367-74020221) | |
| 69-215, gnl|monDom2|scaffold_64 (2969843-2970005) | |
| 69-215, gnl|oryCun1|scaffold_133656 (210-379) | |
| 69-215, gnl|panTro1|chr14 (40559711-40559878) | |
| 69-215, gnl|rheMac2|chr17 (20382894-20383065) | |
| 69-215, gnl|rn3|chr2 (140315841-140315994) | |
| 69-215, gnl|tetNig1|chrUn_random (97269061-97268891) | |
| 69-215, gnl|xenTro1|scaffold_381 (347304-347475) | |
| 310-655, gnl|bosTau2|chr12 (4683376-4683734) | |
| 310-655, gnl|Hg17|chr13 (40847539-40847850) | |
| 310-655, gnl|Mm7|chr14 (74016622-74016296) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbl (0.573987) | |
| med (0.116252) |