Non-Coding RNA Search

Ss1.1-rcbl0_008644.5

Sequence:


               
               GGCTCCTGCCAATCTACTTCCCTGAAACCCCCAGCTCGTCTTACACGCAGTCCACTGTGG
ACCACGATCTCCACGATGCTCTGTAAAAAAAAACAAAAAATGCACAAACAAGGTTAATAA
GCTTCCCAAATTAAGAGCTTACTTAAAATGTTATTGTAGTAAGAGTTTCCTGAATGAGTG
CCAGGAAGAAGAAGAATTACATCCACTGCTAAAAGTAGGGCTTCTCACCCTGCAGTCAGC
TTTTCTTCCTGCCATTTACAAGTTCAGTGCGACCAGAGTTCACCCAGACGGGGGCATCCC
TCCTCGCACCAGGCTTTCCTGGGAATGGGTAAGCCTGAGGAGGATTCTGAGCAATGTTTC
AATGAGGAGGTAGATAATTTTGGAAAGGGAAGACTATTCCCTTCTAACCTGAACTCATGG
GTTCTCCAGAGAGAATTGTACAGAATTGACTTGGGGAGTAAGTAAATCCCTACTTCTTGC
TGTGAAAGTGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTCCTGCCAATCTACTTCCCTGAAACCCCCAGCTCGTCTTACACGCAGTCCACTGTGG
ACCACGATCTCCACGATGCTCTGTAAAAAAAAACAAAAAATGCACAAACAAGGTTAATAA
GCTTCCCAAATTAAGAGCTTACTTAAAATGTTATTGTAGTAAGAGTTTCCTGAATGAGTG
CCAGGAAGAAGAAGAATTACATCCACTGCTAAAAGTAGGGCTTCTCACCCTGCAGTCAGC
TTTTCTTCCTGCCATTTACAAGTTCAGTGCGACCAGAGTTCACCCAGACGGGGGCATCCC
TCCTCGCACCAGGCTTTCCTGGGAATGGGTAAGCCTGAGGAGGATTCTGAGCAATGTTTC
AATGAGGAGGTAGATAATTTTGGAAAGGGAAGACTATTCCCTTCTAACCTGAACTCATGG
GTTCTCCAGAGAGAATTGTACAGAATTGACTTGGGGAGTAAGTAAATCCCTACTTCTTGC
TGTGAAAGTGAG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               42-160, + strand, RNAz p=0.60018

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               42-160, + strand, RNAz p=0.60018

Homologous human UTR: 1 entry(ies)

More info

Homologous human UTR: 1 entry(ies)

Help | Less info


               
               3' of NM_005508, +

Homologous human UTR: 1 entry(ies)

Help | Less info

Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_005508, +

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               3-492, gnl|bosTau2|chr22 (11235756-11235274)
               

               
               3-492, gnl|Hg17|chr3 (32970918-32971401)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-492, gnl|bosTau2|chr22 (11235756-11235274)
               

               
               3-492, gnl|Hg17|chr3 (32970918-32971401)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cbl (0.229595)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.229595)

	3-492, gnl\|bosTau2\|chr22 (11235756-11235274)
	3-492, gnl\|Hg17\|chr3 (32970918-32971401)