Non-Coding RNA Search

Ss1.1-rcbl0_008733.5

Sequence:


               
               TTAAAGTCCCTATTGATAGTGCTATGATACAATAAGCAAAATTTCATCTCCTGAATTTGG
ATGAATTCTGGGACATGACCAATATCAGGCCATAGACCTCTAAGATTGAAGACCCAGGCC
TGGATCATGGTGAACTCACCAAAGCAAATAATGCCTGATGTGCTGGAATTTCCCTCTGGA
AAGGCTGGACTTCTGCAAGTTCTCTCAGGAGGGTTATTACAAACTATTGAGCAGAATTTC
CTATGCTATTCAATTCTGAACCAACTAAAATATACACAGGAATCAAAGAGGGATTAAAAT
ATTAACTTTAATATACTGTTAAGTGACAAAGCAAAATTCAGAACAGCATGTATAGTATGC
CACAATTTGTATAAAAGTTGATATATACATATATAATATACTTGTAAATAGATGAATTAT
CTCTGGAAAAGTACATACTACCTTTGGAAACTAGGACTGGGGTACTGAGGTCAGTGGTGG
GAAAAAAAGGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAAAGTCCCTATTGATAGTGCTATGATACAATAAGCAAAATTTCATCTCCTGAATTTGG
ATGAATTCTGGGACATGACCAATATCAGGCCATAGACCTCTAAGATTGAAGACCCAGGCC
TGGATCATGGTGAACTCACCAAAGCAAATAATGCCTGATGTGCTGGAATTTCCCTCTGGA
AAGGCTGGACTTCTGCAAGTTCTCTCAGGAGGGTTATTACAAACTATTGAGCAGAATTTC
CTATGCTATTCAATTCTGAACCAACTAAAATATACACAGGAATCAAAGAGGGATTAAAAT
ATTAACTTTAATATACTGTTAAGTGACAAAGCAAAATTCAGAACAGCATGTATAGTATGC
CACAATTTGTATAAAAGTTGATATATACATATATAATATACTTGTAAATAGATGAATTAT
CTCTGGAAAAGTACATACTACCTTTGGAAACTAGGACTGGGGTACTGAGGTCAGTGGTGG
GAAAAAAAGGAG

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               18-166, gnl|bosTau2|chr18 (38682487-38682343)
               

               
               18-166, gnl|Hg17|chrX (56726782-56726920)
               

               
               18-166, gnl|Mm7|chrX (148499715-148499864)
               


               
               254-492, gnl|bosTau2|chrX (28615216-28614975)
               

               
               254-492, gnl|Hg17|chrX (56900249-56900529)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-166, gnl|bosTau2|chr18 (38682487-38682343)
               

               
               18-166, gnl|Hg17|chrX (56726782-56726920)
               

               
               18-166, gnl|Mm7|chrX (148499715-148499864)
               


               
               254-492, gnl|bosTau2|chrX (28615216-28614975)
               

               
               254-492, gnl|Hg17|chrX (56900249-56900529)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.344392)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.344392)

	18-166, gnl\|bosTau2\|chr18 (38682487-38682343)
	18-166, gnl\|Hg17\|chrX (56726782-56726920)
	18-166, gnl\|Mm7\|chrX (148499715-148499864)

	254-492, gnl\|bosTau2\|chrX (28615216-28614975)
	254-492, gnl\|Hg17\|chrX (56900249-56900529)