Non-Coding RNA Search

Ss1.1-rcbl0_009013.5

Sequence:


               
               GCAACTTCATATAATGCAAGAACAGCAGAAGTAAGTAGGTTGCATATGAATTGCATACGG
TCCAGGACTAACATTAAAGTTATATCACAATTGGTTTTCTGGAATATGGACTAGAAAAAT
TGAAGGATTTCAGTTTGACTGTATGTAAAAAACATAAAAATTTTCCAACGTGTTGACCTG
AGTTGAAATACTGTGTTGTTCCAAATCTGATGTTGTTTTTGAATATGAAAGCATAATATA
ATCTTTGCATTTTTCTCTACATAAGGAAAATTCTGATTCTGAAAAAATGTCTTGTCACAT
TAGTCACTGGCATTGTAAACTTGGGGTGCTGATCACCAAGAGTACCACATAAAAATGTTT
TTCAAATCTCTGAAACCCTGGTGTTTTGATTTCTCCCTTTCTCTTTTCTCTAACCCCAGA
AACATTTATAGAGAATTCATTTCATATGTAGTACCACAACATCTACATCTTTTTTGTTTG
TATTTTTTAGGGAGGATTTTCTAAATTATTTGCACAATACTAGTATTCAAAGGAGGAGGG
GAAAGGTGAAAATTATTCAATGGAAAATCCCAGGTTCTGTGATCAAATTGGCCATGCTTA
TGGCATGCAGAAGTTCACAGCAGTGACAGTGCTGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAACTTCATATAATGCAAGAACAGCAGAAGTAAGTAGGTTGCATATGAATTGCATACGG
TCCAGGACTAACATTAAAGTTATATCACAATTGGTTTTCTGGAATATGGACTAGAAAAAT
TGAAGGATTTCAGTTTGACTGTATGTAAAAAACATAAAAATTTTCCAACGTGTTGACCTG
AGTTGAAATACTGTGTTGTTCCAAATCTGATGTTGTTTTTGAATATGAAAGCATAATATA
ATCTTTGCATTTTTCTCTACATAAGGAAAATTCTGATTCTGAAAAAATGTCTTGTCACAT
TAGTCACTGGCATTGTAAACTTGGGGTGCTGATCACCAAGAGTACCACATAAAAATGTTT
TTCAAATCTCTGAAACCCTGGTGTTTTGATTTCTCCCTTTCTCTTTTCTCTAACCCCAGA
AACATTTATAGAGAATTCATTTCATATGTAGTACCACAACATCTACATCTTTTTTGTTTG
TATTTTTTAGGGAGGATTTTCTAAATTATTTGCACAATACTAGTATTCAAAGGAGGAGGG
GAAAGGTGAAAATTATTCAATGGAAAATCCCAGGTTCTGTGATCAAATTGGCCATGCTTA
TGGCATGCAGAAGTTCACAGCAGTGACAGTGCTGGA

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               1-153, gnl|bosTau2|chr3 (12356875-12356723)
               

               
               1-153, gnl|Hg17|chr12 (99230483-99230632)
               


               
               154-588, gnl|bosTau2|chr3 (12356527-12356082)
               

               
               154-588, gnl|Hg17|chr12 (99230636-99231073)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-153, gnl|bosTau2|chr3 (12356875-12356723)
               

               
               1-153, gnl|Hg17|chr12 (99230483-99230632)
               


               
               154-588, gnl|bosTau2|chr3 (12356527-12356082)
               

               
               154-588, gnl|Hg17|chr12 (99230636-99231073)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.229595)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.229595)

	1-153, gnl\|bosTau2\|chr3 (12356875-12356723)
	1-153, gnl\|Hg17\|chr12 (99230483-99230632)

	154-588, gnl\|bosTau2\|chr3 (12356527-12356082)
	154-588, gnl\|Hg17\|chr12 (99230636-99231073)