Non-Coding RNA Search

Ss1.1-rcbl0_009025.5

Sequence:


               
               GCGACCTCGGAGAAGGAGCGAGGATTGCGCAGGAGTCTCGTGAGAAAATGAAGACAGTCT
CCAAGGGCTGGTCTGTAGGCGTTTCGTCGTATCGGTGAAGGAAGACTCGGATGAACCGTG
TATATTGTTATAAAGTGCCGTATTTGGTTAATAATCATGGGTTTCCTTTCTTTCAGATAA
GCCGTGGTTTGATTTCAGAAAATGGTACCAAGTTATGAAGAAAGCTATTGATGAGAAAAA
GCAAAAATGGGAGGAAGCCAGGGCGAAGTATCTATGGAAAAGTGAAAGGCCACTCTACCA
CTCAGCCATCGACAAACCAGTGGTCTATAAAAGAAGAGGTGAGTCGGACTTCCTCCCGTC
GCCGCCGAGCAGCAGCACAGTGGCGGAAAAGCTGGGTGTCTTGACCTGAAGGGAGACACA
GACGTGCTTCCCCACTGCGTTAACAAGGCGCCAAAGCGCACTCCCAAGGAACGCCACCTC
CGAAAGAAATTTCAGTGTCTAGTTCAGGAGCAGTGTCTCACTCCAAACGGAAGTTAAGTT
CCCACAAAATCTGAAATGCTGTGTGTCTGTGACTTTCAGACCCTTCATTTGGAGAACTGC
TTTTGGTTGTCGTTCTCATTCTTTTTAAGACTTGTGTTAAAATATAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGACCTCGGAGAAGGAGCGAGGATTGCGCAGGAGTCTCGTGAGAAAATGAAGACAGTCT
CCAAGGGCTGGTCTGTAGGCGTTTCGTCGTATCGGTGAAGGAAGACTCGGATGAACCGTG
TATATTGTTATAAAGTGCCGTATTTGGTTAATAATCATGGGTTTCCTTTCTTTCAGATAA
GCCGTGGTTTGATTTCAGAAAATGGTACCAAGTTATGAAGAAAGCTATTGATGAGAAAAA
GCAAAAATGGGAGGAAGCCAGGGCGAAGTATCTATGGAAAAGTGAAAGGCCACTCTACCA
CTCAGCCATCGACAAACCAGTGGTCTATAAAAGAAGAGGTGAGTCGGACTTCCTCCCGTC
GCCGCCGAGCAGCAGCACAGTGGCGGAAAAGCTGGGTGTCTTGACCTGAAGGGAGACACA
GACGTGCTTCCCCACTGCGTTAACAAGGCGCCAAAGCGCACTCCCAAGGAACGCCACCTC
CGAAAGAAATTTCAGTGTCTAGTTCAGGAGCAGTGTCTCACTCCAAACGGAAGTTAAGTT
CCCACAAAATCTGAAATGCTGTGTGTCTGTGACTTTCAGACCCTTCATTTGGAGAACTGC
TTTTGGTTGTCGTTCTCATTCTTTTTAAGACTTGTGTTAAAATATAGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               60-271, gnl|bosTau2|chr11 (68111947-68111736)
               

               
               60-271, gnl|Hg17|chr2 (10003786-10003980)
               

               
               60-271, gnl|Mm7|chr12 (22385806-22386012)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               60-271, gnl|bosTau2|chr11 (68111947-68111736)
               

               
               60-271, gnl|Hg17|chr2 (10003786-10003980)
               

               
               60-271, gnl|Mm7|chr12 (22385806-22386012)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.229595)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.229595)

	60-271, gnl\|bosTau2\|chr11 (68111947-68111736)
	60-271, gnl\|Hg17\|chr2 (10003786-10003980)
	60-271, gnl\|Mm7\|chr12 (22385806-22386012)