Non-Coding RNA Search

Ss1.1-rcbl0_009088.5

Sequence:


               
               GGGCTGCAGGATGGTAAAGGATTTTGGAGTGACTGGAGTGAAGAAGCAAGTGGGGTCACA
TATGAAGATAGACCATCCAAGGCACCAAGTTTCTGGTATAAGATAGAGCCGTCTCATACT
CATGGCTATAGATCTGTACAACTCATGTGGAAGACATTGCCTCCTTTTGAAGCAAATGGA
AAAATATTGGATTATGAAGTGACTCTCACAAGATGGAAATCACGTTTACAAAATTATACA
GTTAATGACACAAAACTGACAGTAAACCTCACAAATGATCGCTATATAGCAACTCTGACA
GCAAGAAATATGGTTGGCAAATCAGATGCATCTGTTTTAACTATCCCTGCCTGTGATTTT
CAAGGTTTGTATCCATGAGATGGACCTGACTTATGGATGGGAAGAGTAGTTAGGTATGAA
CAGGGCTCCTATAAAAAAAAGTAAGTATTCTAAGCAGTCATCATATTTTTAGAGTTAGTC
AGCAGCGAAATCAGTTCCATCATTATGTGGCTCACTTAAACTTTGCAGTGAGGTACTTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGCTGCAGGATGGTAAAGGATTTTGGAGTGACTGGAGTGAAGAAGCAAGTGGGGTCACA
TATGAAGATAGACCATCCAAGGCACCAAGTTTCTGGTATAAGATAGAGCCGTCTCATACT
CATGGCTATAGATCTGTACAACTCATGTGGAAGACATTGCCTCCTTTTGAAGCAAATGGA
AAAATATTGGATTATGAAGTGACTCTCACAAGATGGAAATCACGTTTACAAAATTATACA
GTTAATGACACAAAACTGACAGTAAACCTCACAAATGATCGCTATATAGCAACTCTGACA
GCAAGAAATATGGTTGGCAAATCAGATGCATCTGTTTTAACTATCCCTGCCTGTGATTTT
CAAGGTTTGTATCCATGAGATGGACCTGACTTATGGATGGGAAGAGTAGTTAGGTATGAA
CAGGGCTCCTATAAAAAAAAGTAAGTATTCTAAGCAGTCATCATATTTTTAGAGTTAGTC
AGCAGCGAAATCAGTTCCATCATTATGTGGCTCACTTAAACTTTGCAGTGAGGTACTTAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|8132803|gb|AAF73398.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|8132803|gb|AAF73398.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               152-539, gnl|bosTau2|chr20 (13328429-13328833)
               

               
               152-539, gnl|Hg17|chr5 (55287822-55287221)
               

               
               152-539, gnl|Mm7|chr13 (109650475-109650855)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               152-539, gnl|bosTau2|chr20 (13328429-13328833)
               

               
               152-539, gnl|Hg17|chr5 (55287822-55287221)
               

               
               152-539, gnl|Mm7|chr13 (109650475-109650855)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.229595)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.229595)

	152-539, gnl\|bosTau2\|chr20 (13328429-13328833)
	152-539, gnl\|Hg17\|chr5 (55287822-55287221)
	152-539, gnl\|Mm7\|chr13 (109650475-109650855)