Non-Coding RNA Search

Ss1.1-rcbl0_009944.5

Sequence:


               
               AATCAAGGTCACAGAGACAGAACAGTGAAACTTACTGCTTGGAGCTGAGGTGAACAAGAT
ACCCACTGAACTGAGTTTCATTCCTGTTGGAGTGTCGTGTTCTTTGAGGAACAGGATAAG
AAAAATACGGACTTGGTTATTACTCTTGACTTGCAGGTCCCTTAAATCGACAGTCTGATG
AAATATTTGCTGATGTATAAAGTGTGGAAATATCCGCGAACATTAGTATTACTCATATTT
GAGCTCTGAGGATGTCCTCTGTGCGTTAATAGTTTAAGAATCTGGGATATTGTGAAATTT
CATTTCTAAAAGCATCTCGGACAGTGGGAAAAATTTCTTTGACAGTGAGACTCTTGTCTT
AGTTCAGGAAATTATTTAATAATCTTTGGTTACCTGGAAGTAACGGAGCTTTGTAGTCCT
TTTTCTCTCGTCAGCATTGCCATAGTCAGCTTAAGCAGTCTTGTTGCGAATAGCCTTGCT
TTGCCTGACGCCAAGGAATTCCGGAGGGAGAGTAGTCTTCCTCTTTTTCTGTGTATATAC
TGAGATGCAAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATCAAGGTCACAGAGACAGAACAGTGAAACTTACTGCTTGGAGCTGAGGTGAACAAGAT
ACCCACTGAACTGAGTTTCATTCCTGTTGGAGTGTCGTGTTCTTTGAGGAACAGGATAAG
AAAAATACGGACTTGGTTATTACTCTTGACTTGCAGGTCCCTTAAATCGACAGTCTGATG
AAATATTTGCTGATGTATAAAGTGTGGAAATATCCGCGAACATTAGTATTACTCATATTT
GAGCTCTGAGGATGTCCTCTGTGCGTTAATAGTTTAAGAATCTGGGATATTGTGAAATTT
CATTTCTAAAAGCATCTCGGACAGTGGGAAAAATTTCTTTGACAGTGAGACTCTTGTCTT
AGTTCAGGAAATTATTTAATAATCTTTGGTTACCTGGAAGTAACGGAGCTTTGTAGTCCT
TTTTCTCTCGTCAGCATTGCCATAGTCAGCTTAAGCAGTCTTGTTGCGAATAGCCTTGCT
TTGCCTGACGCCAAGGAATTCCGGAGGGAGAGTAGTCTTCCTCTTTTTCTGTGTATATAC
TGAGATGCAAAT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               3-547, gnl|bosTau2|chr10 (31213206-31213768)
               

               
               3-547, gnl|Hg17|chr15 (61386794-61387339)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-547, gnl|bosTau2|chr10 (31213206-31213768)
               

               
               3-547, gnl|Hg17|chr15 (61386794-61387339)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cbl (0.573987)
               

               
               ecc (0.115035)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.573987)
               

               
               ecc (0.115035)

	3-547, gnl\|bosTau2\|chr10 (31213206-31213768)
	3-547, gnl\|Hg17\|chr15 (61386794-61387339)