Non-Coding RNA Search

Ss1.1-rcbl0_010158.5

Sequence:


               
               TTTGGAGGAGCAGGTTTCTTTTATTTGGGGGAGAGAAGGAAAGCACAGAACATTAGTACA
GTGGACCAAAAAAACCCAACCCACAACCAAACCACAGTACCACTGGCACAGAAGTTCTCC
TACTTTGTAAAGTTTGTGGCAGGCTTTCCATTAGAACTTCCTATCTTCAGAAACCCATTC
AAGTAACACTTGGTAGTGTCCCATTTTGGCTACAGCCATCACAATTTCAGAACCAGCAAA
TTCCAAATGGGCAAGAGTCCACAGCAGAGTAAGTCATTCAATACCAGCCACTGACCATAA
TTCTTGGGAAGCAAAGGGAATTGTTTTCAATGCTTTTTAGTTTCAGGGAATAGTATGAAA
AGTTAAAAGTAGACACACTTACAGCAGATAACCTCGCAGATCTTCTCTGTGGTTCGTCCT
TCACCTTGGCTTTATCCCCTTTAGCATCCCCTTCAGCCTTTCTCTTGGGCATGGTGACGG
CGGCGGGACGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTGGAGGAGCAGGTTTCTTTTATTTGGGGGAGAGAAGGAAAGCACAGAACATTAGTACA
GTGGACCAAAAAAACCCAACCCACAACCAAACCACAGTACCACTGGCACAGAAGTTCTCC
TACTTTGTAAAGTTTGTGGCAGGCTTTCCATTAGAACTTCCTATCTTCAGAAACCCATTC
AAGTAACACTTGGTAGTGTCCCATTTTGGCTACAGCCATCACAATTTCAGAACCAGCAAA
TTCCAAATGGGCAAGAGTCCACAGCAGAGTAAGTCATTCAATACCAGCCACTGACCATAA
TTCTTGGGAAGCAAAGGGAATTGTTTTCAATGCTTTTTAGTTTCAGGGAATAGTATGAAA
AGTTAAAAGTAGACACACTTACAGCAGATAACCTCGCAGATCTTCTCTGTGGTTCGTCCT
TCACCTTGGCTTTATCCCCTTTAGCATCCCCTTCAGCCTTTCTCTTGGGCATGGTGACGG
CGGCGGGACGTA

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

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               1-257, gnl|bosTau2|chr2 (78338216-78337964)
               

               
               1-257, gnl|Hg17|chr1 (26484734-26484489)
               


               
               290-412, gnl|bosTau2|chr2 (78337963-78337840)
               

               
               290-412, gnl|Hg17|chr1 (26484456-26484336)
               

               
               290-412, gnl|Mm7|chr4 (133345109-133345228)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-257, gnl|bosTau2|chr2 (78338216-78337964)
               

               
               1-257, gnl|Hg17|chr1 (26484734-26484489)
               


               
               290-412, gnl|bosTau2|chr2 (78337963-78337840)
               

               
               290-412, gnl|Hg17|chr1 (26484456-26484336)
               

               
               290-412, gnl|Mm7|chr4 (133345109-133345228)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               elu (0.385356)
               

               
               eye (0.170503)
               

               
               nje (0.16592)
               

               
               liv (0.146284)
               

               
               cbl (0.114797)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               elu (0.385356)
               

               
               eye (0.170503)
               

               
               nje (0.16592)
               

               
               liv (0.146284)
               

               
               cbl (0.114797)

	1-257, gnl\|bosTau2\|chr2 (78338216-78337964)
	1-257, gnl\|Hg17\|chr1 (26484734-26484489)

	290-412, gnl\|bosTau2\|chr2 (78337963-78337840)
	290-412, gnl\|Hg17\|chr1 (26484456-26484336)
	290-412, gnl\|Mm7\|chr4 (133345109-133345228)

	elu (0.385356)
	eye (0.170503)
	nje (0.16592)
	liv (0.146284)
	cbl (0.114797)