Non-Coding RNA Search

Ss1.1-rcbl0_010323.5

Sequence:


               
               CAGATCTTTAAGCCCCTGAGCAAGGCCAGGAATCGAACCCACATCCTCATGGATGCTAGT
CGGATTTGTTTCTGCTGCACCACATGGGAACTCCCTGTTCTGTTTTTTGGAAAAATAGAG
TTAAGAGGACATTGGATTTTTCTTCTAACCCTTTTTTTTTCTATCAAATGGAAAACTGAA
AGCCAAACCAAGAGGGTTACATGTTTCAAAAAATGAGGGAGGGGTTTCCCTTTGGAAGGA
GGGTGTGTTTAATGAGCAAAAAAGTGCTTTTTTGTTAAAAGGATACGACTTTCATTGTCA
CTATGCAGGGCACCCATCCAGCTCCCTCCTCCCCACTTAGGCAGCTGAGCTTGAGATGCC
CCCTGCAGTTTGTGGGTGGTCCCTCTCTTCTCTGGGTAAGTAGAGAGGGAGAAGGTATTT
CTGCCTTTGAGAGGGCGATTCTCTTACCCCGACTTCCACTTCCTGTGGCCTGTGGGCAGT
CACTCTTTTCTTTTTTGCAATATCAGCTGTTGAACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGATCTTTAAGCCCCTGAGCAAGGCCAGGAATCGAACCCACATCCTCATGGATGCTAGT
CGGATTTGTTTCTGCTGCACCACATGGGAACTCCCTGTTCTGTTTTTTGGAAAAATAGAG
TTAAGAGGACATTGGATTTTTCTTCTAACCCTTTTTTTTTCTATCAAATGGAAAACTGAA
AGCCAAACCAAGAGGGTTACATGTTTCAAAAAATGAGGGAGGGGTTTCCCTTTGGAAGGA
GGGTGTGTTTAATGAGCAAAAAAGTGCTTTTTTGTTAAAAGGATACGACTTTCATTGTCA
CTATGCAGGGCACCCATCCAGCTCCCTCCTCCCCACTTAGGCAGCTGAGCTTGAGATGCC
CCCTGCAGTTTGTGGGTGGTCCCTCTCTTCTCTGGGTAAGTAGAGAGGGAGAAGGTATTT
CTGCCTTTGAGAGGGCGATTCTCTTACCCCGACTTCCACTTCCTGTGGCCTGTGGGCAGT
CACTCTTTTCTTTTTTGCAATATCAGCTGTTGAACT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               287-393, + strand, RNAz p=0.633406

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               287-393, + strand, RNAz p=0.633406

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               249-516, gnl|bosTau2|chr13 (57249280-57249001)
               

               
               249-516, gnl|Hg17|chr20 (46860082-46859802)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               249-516, gnl|bosTau2|chr13 (57249280-57249001)
               

               
               249-516, gnl|Hg17|chr20 (46860082-46859802)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cbl (0.229595)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.229595)

	249-516, gnl\|bosTau2\|chr13 (57249280-57249001)
	249-516, gnl\|Hg17\|chr20 (46860082-46859802)