Non-Coding RNA Search

Ss1.1-rcbl0_010649.5

Sequence:


               
               AACATGATGAGGGTATGCTTGAATATTTAGAAGATATAATTGGTTCTGGACGACTAAATG
AACCTATTAAAGTCTTGTGTCGGAGAGTTGAAATATTAAATGAACACAGAGGAGAGAAGT
TAAACAGAGTCAAGATGGTAGAAAAGGAAAAGGATGCCTTAGAAGGAGAAAAAAACATAG
CCATTGAATTTCTTACCTTGGAAAATGAAATATTTAGAAAAAAGAATCATGTGTGTCAGT
ATTATATTTATGATCTGCAGAAACGAATTGCTGAAATGGAAACTCAAAAGGAAAAAATTC
ATGAAGATACCAAAGAAATTAATGAAAAGAGCAATATACTCTCAAATGAAATGAAAGCTA
AGAATAAAGCTGTAAAAGATGTAGAGAAGAAACTGAATAAAATCACAAAATTTATTGAGG
AGAACAAAGAAAAATTTACAAAGCTAGACTTGGAAGATGTTCAAGTTAGGGAAAAACTAA
AACATGCTACAAGTAAAGCCAAAAAACTGGAGAAACAACTTCAAAAAGATAAAGAAAAGG
TTGAAGAATTTAAAAGTATACCTGCAAAGAGTGAGAATATCATAACTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACATGATGAGGGTATGCTTGAATATTTAGAAGATATAATTGGTTCTGGACGACTAAATG
AACCTATTAAAGTCTTGTGTCGGAGAGTTGAAATATTAAATGAACACAGAGGAGAGAAGT
TAAACAGAGTCAAGATGGTAGAAAAGGAAAAGGATGCCTTAGAAGGAGAAAAAAACATAG
CCATTGAATTTCTTACCTTGGAAAATGAAATATTTAGAAAAAAGAATCATGTGTGTCAGT
ATTATATTTATGATCTGCAGAAACGAATTGCTGAAATGGAAACTCAAAAGGAAAAAATTC
ATGAAGATACCAAAGAAATTAATGAAAAGAGCAATATACTCTCAAATGAAATGAAAGCTA
AGAATAAAGCTGTAAAAGATGTAGAGAAGAAACTGAATAAAATCACAAAATTTATTGAGG
AGAACAAAGAAAAATTTACAAAGCTAGACTTGGAAGATGTTCAAGTTAGGGAAAAACTAA
AACATGCTACAAGTAAAGCCAAAAAACTGGAGAAACAACTTCAAAAAGATAAAGAAAAGG
TTGAAGAATTTAAAAGTATACCTGCAAAGAGTGAGAATATCATAACTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-124, gnl|bosTau2|chr1 (70889036-70889159)
               

               
               1-124, gnl|Hg17|chr3 (161612456-161612579)
               

               
               1-124, gnl|Mm7|chr3 (69117145-69117272)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-124, gnl|bosTau2|chr1 (70889036-70889159)
               

               
               1-124, gnl|Hg17|chr3 (161612456-161612579)
               

               
               1-124, gnl|Mm7|chr3 (69117145-69117272)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cbl (0.803582)
               

               
               ova (0.129132)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.803582)
               

               
               ova (0.129132)

	1-124, gnl\|bosTau2\|chr1 (70889036-70889159)
	1-124, gnl\|Hg17\|chr3 (161612456-161612579)
	1-124, gnl\|Mm7\|chr3 (69117145-69117272)