Non-Coding RNA Search

Ss1.1-rcbl0_011727.5

Sequence:


               
               GTTTTTTTTTTTTTTTTTTTTTTTTGTACCTACCATCATTCTTAATAAATGCCACACCAT
TTACCAGTACAAGAAAACATAGGCAGCCCCGCCACCACAGCTGCCCCTGCCCCCCGCAAA
AAAACTCAGCAGTTAGACGGACAGTGTGGCTGTGGAAGGCTTTCCCTGAGATACTTAATT
GAGATGGGCCTCAGGCTGTCACAGTTGTTAAAACCAGTGTGGGTTGCTTTGTTGGCAAAA
TGGCCCAAAAGCTGGCTTCCCTGAGCAACTTCACTGAAAGTGTTGGTGGCGCCAGTTAAA
ACATCCATTCAGACCTGCTTGGTGGCATTAATCTGTGTGAATGCAAATTAGGTTTCAGAT
TGAACTTGTTATGTGAGTTAATGAGGAGTGGGTTCAGCAAATGCTAAAGTGTTCATTTCC
AACGTGCAGATGTGGTCGAGCAGTTCAGTTGTTATGCAGTCTTATCCCACCAACCCAGTC
TCAAAAACCAACAGCAGAACACCTCAGGTAGATGGGGGCACAGCTCAGCCCTGGGCTTTT
TGGGAAACAAACATGGCGCCCAGAACACAACCATCATGGGTCAGTACAGCCCCAGCCCTT
TGAAACCCTGAACATTTCCACTCTGCACCCCCTTTCTTATCAAACTCATTTATTTAATAA
TAAATATCTAGGACTGTAGCTTTTGCTTTAGTTTGAGAGCCTTTTGGAGCTTAATTTATA
CGCTTTGTACCTTTTTTTTCCCTAAAATTACCAAAGATATTACACAAAGGTAAATTATGT
TCTCTGTTTTATGCTTTATCTGATGAAGCCAAATATCCTCTTATTGTTGATCAAAGGAGG
CGAAAGAATTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTTTTTTTTTTTTTTTTTTTTTTGTACCTACCATCATTCTTAATAAATGCCACACCAT
TTACCAGTACAAGAAAACATAGGCAGCCCCGCCACCACAGCTGCCCCTGCCCCCCGCAAA
AAAACTCAGCAGTTAGACGGACAGTGTGGCTGTGGAAGGCTTTCCCTGAGATACTTAATT
GAGATGGGCCTCAGGCTGTCACAGTTGTTAAAACCAGTGTGGGTTGCTTTGTTGGCAAAA
TGGCCCAAAAGCTGGCTTCCCTGAGCAACTTCACTGAAAGTGTTGGTGGCGCCAGTTAAA
ACATCCATTCAGACCTGCTTGGTGGCATTAATCTGTGTGAATGCAAATTAGGTTTCAGAT
TGAACTTGTTATGTGAGTTAATGAGGAGTGGGTTCAGCAAATGCTAAAGTGTTCATTTCC
AACGTGCAGATGTGGTCGAGCAGTTCAGTTGTTATGCAGTCTTATCCCACCAACCCAGTC
TCAAAAACCAACAGCAGAACACCTCAGGTAGATGGGGGCACAGCTCAGCCCTGGGCTTTT
TGGGAAACAAACATGGCGCCCAGAACACAACCATCATGGGTCAGTACAGCCCCAGCCCTT
TGAAACCCTGAACATTTCCACTCTGCACCCCCTTTCTTATCAAACTCATTTATTTAATAA
TAAATATCTAGGACTGTAGCTTTTGCTTTAGTTTGAGAGCCTTTTGGAGCTTAATTTATA
CGCTTTGTACCTTTTTTTTCCCTAAAATTACCAAAGATATTACACAAAGGTAAATTATGT
TCTCTGTTTTATGCTTTATCTGATGAAGCCAAATATCCTCTTATTGTTGATCAAAGGAGG
CGAAAGAATTTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-852, gnl|bosTau2|chr22 (24793111-24793933)
               

               
               6-852, gnl|Hg17|chr3 (71090065-71089256)
               

               
               6-852, gnl|Mm7|chr6 (99017012-99016252)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-852, gnl|bosTau2|chr22 (24793111-24793933)
               

               
               6-852, gnl|Hg17|chr3 (71090065-71089256)
               

               
               6-852, gnl|Mm7|chr6 (99017012-99016252)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.114797)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.114797)

	6-852, gnl\|bosTau2\|chr22 (24793111-24793933)
	6-852, gnl\|Hg17\|chr3 (71090065-71089256)
	6-852, gnl\|Mm7\|chr6 (99017012-99016252)