Non-Coding RNA Search

Ss1.1-rcbl0_013915.5

Sequence:


               
               CGTAAATAATCTTCTAATTCAACACAAAAAAGAGCCATAAAAAAGTGCCAGTGATTAAAA
TGGCTATCTGAAATGCAGCCTCACTCTTTGAATGGAAATCATTTCTTACTGTTTATGAAA
TTTCAATTTAGTGGTTGGCAACCATGGATTTATTTTACTGCAAAATATGAAGTTTACATT
TTATTAACACTTTAGTCTAATTTAGAGACTAATGACTCCTATTTTTTTAAGTAGAGGACT
AACAGTGTACAGAAGAGCTAATTTTTTTAATGTATTTTAAAGTTGTAAAAAAATGAAAAA
GGGAGAATATGCAACAGAGAAGTGACCCAAAAAACCTAAAATATTTATTATCTGGATCTT
TACAGAACGTGTTTGCTGACTCTTGCATTAAAGGATTATGAAAAGTCTTCTAGAGTTTAG
GAATCTTTATTAAAATACCTGTAAAGGAAATAGTTACTGTAGTGATAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGTAAATAATCTTCTAATTCAACACAAAAAAGAGCCATAAAAAAGTGCCAGTGATTAAAA
TGGCTATCTGAAATGCAGCCTCACTCTTTGAATGGAAATCATTTCTTACTGTTTATGAAA
TTTCAATTTAGTGGTTGGCAACCATGGATTTATTTTACTGCAAAATATGAAGTTTACATT
TTATTAACACTTTAGTCTAATTTAGAGACTAATGACTCCTATTTTTTTAAGTAGAGGACT
AACAGTGTACAGAAGAGCTAATTTTTTTAATGTATTTTAAAGTTGTAAAAAAATGAAAAA
GGGAGAATATGCAACAGAGAAGTGACCCAAAAAACCTAAAATATTTATTATCTGGATCTT
TACAGAACGTGTTTGCTGACTCTTGCATTAAAGGATTATGAAAAGTCTTCTAGAGTTTAG
GAATCTTTATTAAAATACCTGTAAAGGAAATAGTTACTGTAGTGATAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               18-452, gnl|bosTau2|chr22 (23609343-23609772)
               

               
               18-452, gnl|Hg17|chr3 (69108012-69107596)
               

               
               18-452, gnl|Mm7|chr6 (97199022-97198649)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-452, gnl|bosTau2|chr22 (23609343-23609772)
               

               
               18-452, gnl|Hg17|chr3 (69108012-69107596)
               

               
               18-452, gnl|Mm7|chr6 (97199022-97198649)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cbl (0.344392)
               

               
               med (0.116252)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.344392)
               

               
               med (0.116252)

	18-452, gnl\|bosTau2\|chr22 (23609343-23609772)
	18-452, gnl\|Hg17\|chr3 (69108012-69107596)
	18-452, gnl\|Mm7\|chr6 (97199022-97198649)