Ss1.1-rcbl0_015294.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTGAAATCTTGAGTGACGTGCAGCTGATCAAAACTGGAGACAAAGTGGGCGCCAGCGAA GCCACTCTGCTGAACATGTTGAACATCTCGCCCTTCTCCTTCGGGCTCATCATCCAGCAA GTGTTTGATAATGGCAGCATTTACAACCCGGAAGTTTTGGATATCACTGAGGAAACGTTG CACAAACGTTTTCTGGAAGGCGTTCGTAACGTAGCCAGCGTTTGCCTGCAGATCGGCTAT CCTACTGTTGCTTCTATACCCCATTCCATCATCAATGGGTACAAGCGAGTCCTGGCTGTG GCTGTGGAGACCAACTACTCTTTCCCACTAGCTGAAAAGGTAAAGGCCTTCCTGGCTGAT CCATCGGCTTTTGCCGCCGCTGCCCCAGCAGTGACCGAAGCAGCTGTTCCTGCTTCAGCA GCTCCAGTCAAAGAGGAAGTCAAGGAAGAATCTGAAGAGTCTGATGAAGACATGGGCTTT GGTCTCTTTGACTAATCACCTGTCCTAGGCTGAGTAGAGTGGAATTCAAAAGAAATGAAT AAAAGTATACTTCTTTTAAAAAAAAAAAAAAAAAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTGAAATCTTGAGTGACGTGCAGCTGATCAAAACTGGAGACAAAGTGGGCGCCAGCGAA GCCACTCTGCTGAACATGTTGAACATCTCGCCCTTCTCCTTCGGGCTCATCATCCAGCAA GTGTTTGATAATGGCAGCATTTACAACCCGGAAGTTTTGGATATCACTGAGGAAACGTTG CACAAACGTTTTCTGGAAGGCGTTCGTAACGTAGCCAGCGTTTGCCTGCAGATCGGCTAT CCTACTGTTGCTTCTATACCCCATTCCATCATCAATGGGTACAAGCGAGTCCTGGCTGTG GCTGTGGAGACCAACTACTCTTTCCCACTAGCTGAAAAGGTAAAGGCCTTCCTGGCTGAT CCATCGGCTTTTGCCGCCGCTGCCCCAGCAGTGACCGAAGCAGCTGTTCCTGCTTCAGCA GCTCCAGTCAAAGAGGAAGTCAAGGAAGAATCTGAAGAGTCTGATGAAGACATGGGCTTT GGTCTCTTTGACTAATCACCTGTCCTAGGCTGAGTAGAGTGGAATTCAAAAGAAATGAAT AAAAGTATACTTCTTTTAAAAAAAAAAAAAAAAAAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 96 entry(ies) | More info |
| Aligned organism(s): 96 entry(ies) | Help | Less info |
| 12-197, gnl|bosTau2|chr17 (38460026-38460211) | |
| 12-197, gnl|canFam2|chr12 (41084150-41083970) | |
| 12-197, gnl|canFam2|chr26 (19177184-19177309) | |
| 12-197, gnl|canFam2|chr35 (16688971-16689157) | |
| 12-197, gnl|canFam2|chr35 (16689158-16688974) | |
| 12-197, gnl|canFam2|chr35 (16689158-16688996) | |
| 12-197, gnl|canFam2|chr35 (16688970-16689157) | |
| 12-197, gnl|danRer3|chrNA (189784261-189784390) | |
| 12-197, gnl|dasNov1|scaffold_110776 (971-1151) | |
| 12-197, gnl|dasNov1|scaffold_154449 (1795-1606) | |
| 12-197, gnl|dasNov1|scaffold_154449 (1605-1792) | |
| 12-197, gnl|dasNov1|scaffold_154449 (1605-1769) | |
| 12-197, gnl|dasNov1|scaffold_154449 (1795-1668) | |
| 12-197, gnl|dasNov1|scaffold_154449 (1796-1606) | |
| 12-197, gnl|echTel1|scaffold_315338 (69864-69678) | |
| 12-197, gnl|echTel1|scaffold_315338 (69677-69861) | |
| 12-197, gnl|echTel1|scaffold_315338 (69858-69678) | |
| 12-197, gnl|echTel1|scaffold_315338 (69677-69839) | |
| 12-197, gnl|echTel1|scaffold_315338 (69864-69740) | |
| 12-197, gnl|echTel1|scaffold_315338 (69865-69678) | |
| 12-197, gnl|fr1|chrUn (58906797-58906983) | |
| 12-197, gnl|fr1|chrUn (58906984-58906753) | |
| 12-197, gnl|fr1|chrUn (58906803-58906983) | |
| 12-197, gnl|fr1|chrUn (58906984-58906820) | |
| 12-197, gnl|fr1|chrUn (58906796-58906921) | |
| 12-197, gnl|fr1|chrUn (58906796-58906983) | |
| 12-197, gnl|galGal2|chr15 (9362156-9361970) | |
| 12-197, gnl|galGal2|chr15 (9361969-9362153) | |
| 12-197, gnl|galGal2|chr15 (9361970-9362131) | |
| 12-197, gnl|galGal2|chr15 (9362157-9362032) | |
| 12-197, gnl|galGal2|chr15 (9362157-9361970) | |
| 12-197, gnl|hg17|chr1 (150011072-150011258) | |
| 12-197, gnl|hg17|chr12 (119099076-119099201) | |
| 12-197, gnl|Hg17|chr12 (119099263-119099078) | |
| 12-197, gnl|hg17|chr14 (34927376-34927562) | |
| 12-197, gnl|hg17|chr15 (38392137-38392322) | |
| 12-197, gnl|hg17|chr18 (46238694-46238856) | |
| 12-197, gnl|hg17|chr3 (68765863-68766031) | |
| 12-197, gnl|loxAfr1|scaffold_2359 (73712-73898) | |
| 12-197, gnl|loxAfr1|scaffold_2359 (73899-73715) | |
| 12-197, gnl|loxAfr1|scaffold_2359 (73718-73898) | |
| 12-197, gnl|loxAfr1|scaffold_2359 (73899-73737) | |
| 12-197, gnl|loxAfr1|scaffold_2359 (73710-73836) | |
| 12-197, gnl|loxAfr1|scaffold_2359 (73711-73898) | |
| 12-197, gnl|mm7|chr13 (65312338-65312158) | |
| 12-197, gnl|mm7|chr5 (114782380-114782255) | |
| 12-197, gnl|Mm7|chr5 (114782191-114782376) | |
| 12-197, gnl|mm7|chr8 (101458959-101459145) | |
| 12-197, gnl|mm7|chr8 (101459146-101458962) | |
| 12-197, gnl|mm7|chr8 (101459146-101458984) | |
| 12-197, gnl|mm7|chr8 (101458958-101459145) | |
| 12-197, gnl|monDom2|scaffold_101 (73999-73813) | |
| 12-197, gnl|monDom2|scaffold_101 (73812-73974) | |
| 12-197, gnl|monDom2|scaffold_101 (74000-73875) | |
| 12-197, gnl|monDom2|scaffold_101 (74000-73813) | |
| 12-197, gnl|monDom2|scaffold_9 (19903096-19903254) | |
| 12-197, gnl|monDom2|scaffold_9 (19903251-19903097) | |
| 12-197, gnl|oryCun1|scaffold_102508 (2415-2601) | |
| 12-197, gnl|oryCun1|scaffold_102508 (2602-2418) | |
| 12-197, gnl|oryCun1|scaffold_102508 (2421-2601) | |
| 12-197, gnl|oryCun1|scaffold_102508 (2602-2440) | |
| 12-197, gnl|oryCun1|scaffold_102508 (2414-2601) | |
| 12-197, gnl|oryCun1|scaffold_96788 (452-327) | |
| 12-197, gnl|panTro1|chr1 (131989288-131989474) | |
| 12-197, gnl|panTro1|chr10 (122098956-122099081) | |
| 12-197, gnl|panTro1|chr12 (40104053-40103867) | |
| 12-197, gnl|panTro1|chr16 (38275504-38275689) | |
| 12-197, gnl|panTro1|chr17 (42820112-42820274) | |
| 12-197, gnl|panTro1|chr2 (70530952-70531120) | |
| 12-197, gnl|rheMac2|chr1 (131742224-131742406) | |
| 12-197, gnl|rheMac2|chr11 (121200374-121200499) | |
| 12-197, gnl|rheMac2|chr18 (43553894-43554056) | |
| 12-197, gnl|rheMac2|chr2 (67525546-67525376) | |
| 12-197, gnl|rheMac2|chr7 (98344635-98344821) | |
| 12-197, gnl|rheMac2|chr7 (18646477-18646653) | |
| 12-197, gnl|rn3|chr12 (42180439-42180564) | |
| 12-197, gnl|rn3|chr2 (199618018-199617847) | |
| 12-197, gnl|rn3|chr8 (124274120-124273935) | |
| 12-197, gnl|rn3|chr8 (124273934-124274117) | |
| 12-197, gnl|rn3|chr8 (124273934-124274095) | |
| 12-197, gnl|rn3|chr8 (124274121-124273935) | |
| 12-197, gnl|tetNig1|chrUn_random (43647804-43647990) | |
| 12-197, gnl|tetNig1|chrUn_random (43647991-43647763) | |
| 12-197, gnl|tetNig1|chrUn_random (43647810-43647990) | |
| 12-197, gnl|tetNig1|chrUn_random (43647991-43647827) | |
| 12-197, gnl|tetNig1|chrUn_random (43647803-43647928) | |
| 12-197, gnl|tetNig1|chrUn_random (43647803-43647990) | |
| 12-197, gnl|xenTro1|scaffold_9 (4666872-4667058) | |
| 12-197, gnl|xenTro1|scaffold_9 (4667059-4666875) | |
| 12-197, gnl|xenTro1|scaffold_9 (4666878-4667058) | |
| 12-197, gnl|xenTro1|scaffold_9 (4667059-4666897) | |
| 12-197, gnl|xenTro1|scaffold_9 (4666871-4666996) | |
| 12-197, gnl|xenTro1|scaffold_9 (4666871-4667058) | |
| 223-386, gnl|bosTau2|chr13 (4929526-4929366) | |
| 223-386, gnl|Hg17|chr20 (16515232-16515053) | |
| 223-386, gnl|Mm7|chr8 (101458934-101458771) |
| Aligned organism(s): 96 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 12-197, gnl|bosTau2|chr17 (38460026-38460211) | |
| 12-197, gnl|canFam2|chr12 (41084150-41083970) | |
| 12-197, gnl|canFam2|chr26 (19177184-19177309) | |
| 12-197, gnl|canFam2|chr35 (16688971-16689157) | |
| 12-197, gnl|canFam2|chr35 (16689158-16688974) | |
| 12-197, gnl|canFam2|chr35 (16689158-16688996) | |
| 12-197, gnl|canFam2|chr35 (16688970-16689157) | |
| 12-197, gnl|danRer3|chrNA (189784261-189784390) | |
| 12-197, gnl|dasNov1|scaffold_110776 (971-1151) | |
| 12-197, gnl|dasNov1|scaffold_154449 (1795-1606) | |
| 12-197, gnl|dasNov1|scaffold_154449 (1605-1792) | |
| 12-197, gnl|dasNov1|scaffold_154449 (1605-1769) | |
| 12-197, gnl|dasNov1|scaffold_154449 (1795-1668) | |
| 12-197, gnl|dasNov1|scaffold_154449 (1796-1606) | |
| 12-197, gnl|echTel1|scaffold_315338 (69864-69678) | |
| 12-197, gnl|echTel1|scaffold_315338 (69677-69861) | |
| 12-197, gnl|echTel1|scaffold_315338 (69858-69678) | |
| 12-197, gnl|echTel1|scaffold_315338 (69677-69839) | |
| 12-197, gnl|echTel1|scaffold_315338 (69864-69740) | |
| 12-197, gnl|echTel1|scaffold_315338 (69865-69678) | |
| 12-197, gnl|fr1|chrUn (58906797-58906983) | |
| 12-197, gnl|fr1|chrUn (58906984-58906753) | |
| 12-197, gnl|fr1|chrUn (58906803-58906983) | |
| 12-197, gnl|fr1|chrUn (58906984-58906820) | |
| 12-197, gnl|fr1|chrUn (58906796-58906921) | |
| 12-197, gnl|fr1|chrUn (58906796-58906983) | |
| 12-197, gnl|galGal2|chr15 (9362156-9361970) | |
| 12-197, gnl|galGal2|chr15 (9361969-9362153) | |
| 12-197, gnl|galGal2|chr15 (9361970-9362131) | |
| 12-197, gnl|galGal2|chr15 (9362157-9362032) | |
| 12-197, gnl|galGal2|chr15 (9362157-9361970) | |
| 12-197, gnl|hg17|chr1 (150011072-150011258) | |
| 12-197, gnl|hg17|chr12 (119099076-119099201) | |
| 12-197, gnl|Hg17|chr12 (119099263-119099078) | |
| 12-197, gnl|hg17|chr14 (34927376-34927562) | |
| 12-197, gnl|hg17|chr15 (38392137-38392322) | |
| 12-197, gnl|hg17|chr18 (46238694-46238856) | |
| 12-197, gnl|hg17|chr3 (68765863-68766031) | |
| 12-197, gnl|loxAfr1|scaffold_2359 (73712-73898) | |
| 12-197, gnl|loxAfr1|scaffold_2359 (73899-73715) | |
| 12-197, gnl|loxAfr1|scaffold_2359 (73718-73898) | |
| 12-197, gnl|loxAfr1|scaffold_2359 (73899-73737) | |
| 12-197, gnl|loxAfr1|scaffold_2359 (73710-73836) | |
| 12-197, gnl|loxAfr1|scaffold_2359 (73711-73898) | |
| 12-197, gnl|mm7|chr13 (65312338-65312158) | |
| 12-197, gnl|mm7|chr5 (114782380-114782255) | |
| 12-197, gnl|Mm7|chr5 (114782191-114782376) | |
| 12-197, gnl|mm7|chr8 (101458959-101459145) | |
| 12-197, gnl|mm7|chr8 (101459146-101458962) | |
| 12-197, gnl|mm7|chr8 (101459146-101458984) | |
| 12-197, gnl|mm7|chr8 (101458958-101459145) | |
| 12-197, gnl|monDom2|scaffold_101 (73999-73813) | |
| 12-197, gnl|monDom2|scaffold_101 (73812-73974) | |
| 12-197, gnl|monDom2|scaffold_101 (74000-73875) | |
| 12-197, gnl|monDom2|scaffold_101 (74000-73813) | |
| 12-197, gnl|monDom2|scaffold_9 (19903096-19903254) | |
| 12-197, gnl|monDom2|scaffold_9 (19903251-19903097) | |
| 12-197, gnl|oryCun1|scaffold_102508 (2415-2601) | |
| 12-197, gnl|oryCun1|scaffold_102508 (2602-2418) | |
| 12-197, gnl|oryCun1|scaffold_102508 (2421-2601) | |
| 12-197, gnl|oryCun1|scaffold_102508 (2602-2440) | |
| 12-197, gnl|oryCun1|scaffold_102508 (2414-2601) | |
| 12-197, gnl|oryCun1|scaffold_96788 (452-327) | |
| 12-197, gnl|panTro1|chr1 (131989288-131989474) | |
| 12-197, gnl|panTro1|chr10 (122098956-122099081) | |
| 12-197, gnl|panTro1|chr12 (40104053-40103867) | |
| 12-197, gnl|panTro1|chr16 (38275504-38275689) | |
| 12-197, gnl|panTro1|chr17 (42820112-42820274) | |
| 12-197, gnl|panTro1|chr2 (70530952-70531120) | |
| 12-197, gnl|rheMac2|chr1 (131742224-131742406) | |
| 12-197, gnl|rheMac2|chr11 (121200374-121200499) | |
| 12-197, gnl|rheMac2|chr18 (43553894-43554056) | |
| 12-197, gnl|rheMac2|chr2 (67525546-67525376) | |
| 12-197, gnl|rheMac2|chr7 (98344635-98344821) | |
| 12-197, gnl|rheMac2|chr7 (18646477-18646653) | |
| 12-197, gnl|rn3|chr12 (42180439-42180564) | |
| 12-197, gnl|rn3|chr2 (199618018-199617847) | |
| 12-197, gnl|rn3|chr8 (124274120-124273935) | |
| 12-197, gnl|rn3|chr8 (124273934-124274117) | |
| 12-197, gnl|rn3|chr8 (124273934-124274095) | |
| 12-197, gnl|rn3|chr8 (124274121-124273935) | |
| 12-197, gnl|tetNig1|chrUn_random (43647804-43647990) | |
| 12-197, gnl|tetNig1|chrUn_random (43647991-43647763) | |
| 12-197, gnl|tetNig1|chrUn_random (43647810-43647990) | |
| 12-197, gnl|tetNig1|chrUn_random (43647991-43647827) | |
| 12-197, gnl|tetNig1|chrUn_random (43647803-43647928) | |
| 12-197, gnl|tetNig1|chrUn_random (43647803-43647990) | |
| 12-197, gnl|xenTro1|scaffold_9 (4666872-4667058) | |
| 12-197, gnl|xenTro1|scaffold_9 (4667059-4666875) | |
| 12-197, gnl|xenTro1|scaffold_9 (4666878-4667058) | |
| 12-197, gnl|xenTro1|scaffold_9 (4667059-4666897) | |
| 12-197, gnl|xenTro1|scaffold_9 (4666871-4666996) | |
| 12-197, gnl|xenTro1|scaffold_9 (4666871-4667058) | |
| 223-386, gnl|bosTau2|chr13 (4929526-4929366) | |
| 223-386, gnl|Hg17|chr20 (16515232-16515053) | |
| 223-386, gnl|Mm7|chr8 (101458934-101458771) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbl (0.344392) |