Non-Coding RNA Search

Ss1.1-rcbl0_016438.5

Sequence:


               
               CTGAATTTTTTAATACTTCAAAAGCCATAACAGTTGAGAAGTACTGGTGGCATCCGTGGT
GAGTGATTTTATCCTATGCAGGCCTCTTGCTCAGTTCCACAGCAGTTGCACAAATTTATG
ATCCTTACCAGAGAAAAGATCAATACCTTACTGATACTATGAAGGAGAGAATTAACTAAA
CCTAAAGCGTACACCCTGCTGACCTAAAAATACCACTTTCAAATATGAGCACAAGATCAC
ACCCAGCTCCAAATAACTTGAACAGACTGTCAGAGACAACTAACCAATTTTCTAAATCTT
GGGTCTCTCCCTACCAAGCCTCTTCATTAAAAATCAGTAATTTCATCTACTCCCTTTCTG
CTTTTGAGGTCAAGTGGTTATCAACTCATAACAAAACTATCAATAGTTTGAGTCTCATTT
ATGCATAATTGGTTGAGAATTCAAAATGAGAATATGAATGTGCCAACAATTTTTAATGTT
TTCTAGTGAAATGATATACCAGCGCTTGCATAGATAATGCTCAGACACTTAGTGGTAATC
TATAGAGACATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGAATTTTTTAATACTTCAAAAGCCATAACAGTTGAGAAGTACTGGTGGCATCCGTGGT
GAGTGATTTTATCCTATGCAGGCCTCTTGCTCAGTTCCACAGCAGTTGCACAAATTTATG
ATCCTTACCAGAGAAAAGATCAATACCTTACTGATACTATGAAGGAGAGAATTAACTAAA
CCTAAAGCGTACACCCTGCTGACCTAAAAATACCACTTTCAAATATGAGCACAAGATCAC
ACCCAGCTCCAAATAACTTGAACAGACTGTCAGAGACAACTAACCAATTTTCTAAATCTT
GGGTCTCTCCCTACCAAGCCTCTTCATTAAAAATCAGTAATTTCATCTACTCCCTTTCTG
CTTTTGAGGTCAAGTGGTTATCAACTCATAACAAAACTATCAATAGTTTGAGTCTCATTT
ATGCATAATTGGTTGAGAATTCAAAATGAGAATATGAATGTGCCAACAATTTTTAATGTT
TTCTAGTGAAATGATATACCAGCGCTTGCATAGATAATGCTCAGACACTTAGTGGTAATC
TATAGAGACATG

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-546, gnl|bosTau2|chr10 (54250836-54250301)
               

               
               1-546, gnl|Hg17|chr14 (66921465-66922370)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-546, gnl|bosTau2|chr10 (54250836-54250301)
               

               
               1-546, gnl|Hg17|chr14 (66921465-66922370)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               cbl (0.229595)
               

               
               liv (0.146284)
               

               
               ssp (0.13552)
               

               
               kid (0.129735)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.229595)
               

               
               liv (0.146284)
               

               
               ssp (0.13552)
               

               
               kid (0.129735)

	1-546, gnl\|bosTau2\|chr10 (54250836-54250301)
	1-546, gnl\|Hg17\|chr14 (66921465-66922370)