Non-Coding RNA Search

Ss1.1-rcbl0_016512.5

Sequence:


               
               GAAAAGGATGAGGAAGATGGAGAAGATGCCCTCCCGTATCGGAATAGTGACCCCATGATT
GGAAACCATACAGAGAAGGGCTCCCTGAAAGCCAGTGACTCCATGGACAGCCTCTACAGT
GGGCAGAGCTCATCAAGTGGTATAACAAGCTGTTCAGATGGTACAAGTAACCGGGACAGC
TTTCGGCTTGATGATGATAGCCCCTACTCAGGACCCTTCTGTGGCCGTGCCAGAGTACAT
ACGGATTTCACACCAAGTCCCTATGACACTGACTCCCTCAAAATCAAGAAAGGAGATATC
ATAGACATTATCTGCAAAACGCCAATGGGGATGTGGACTGGAATGCTGAACAATAAAGTG
GGAAACTTCAAATTTATTTATGTCGATGTCATCTCAGAAGAAGAAGAAGCAGCCCCCAAG
AAAATAAAGGCACACAAAAGAAGTGGAAAGGAAAAACCCAAGACTCTGCAGGAGTTCTTA
GAGAGGATTCACCTTCAGGAATATACCTCAACACTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAAAGGATGAGGAAGATGGAGAAGATGCCCTCCCGTATCGGAATAGTGACCCCATGATT
GGAAACCATACAGAGAAGGGCTCCCTGAAAGCCAGTGACTCCATGGACAGCCTCTACAGT
GGGCAGAGCTCATCAAGTGGTATAACAAGCTGTTCAGATGGTACAAGTAACCGGGACAGC
TTTCGGCTTGATGATGATAGCCCCTACTCAGGACCCTTCTGTGGCCGTGCCAGAGTACAT
ACGGATTTCACACCAAGTCCCTATGACACTGACTCCCTCAAAATCAAGAAAGGAGATATC
ATAGACATTATCTGCAAAACGCCAATGGGGATGTGGACTGGAATGCTGAACAATAAAGTG
GGAAACTTCAAATTTATTTATGTCGATGTCATCTCAGAAGAAGAAGAAGCAGCCCCCAAG
AAAATAAAGGCACACAAAAGAAGTGGAAAGGAAAAACCCAAGACTCTGCAGGAGTTCTTA
GAGAGGATTCACCTTCAGGAATATACCTCAACACTT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61882435|ref|XP_613840.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61882435|ref|XP_613840.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               4-161, gnl|bosTau2|chr1 (14574904-14575064)
               

               
               4-161, gnl|Hg17|chr21 (14806768-14806600)
               

               
               4-161, gnl|Mm7|chr16 (75876525-75876357)
               


               
               287-499, gnl|bosTau2|chr1 (14582891-14583097)
               

               
               287-499, gnl|Hg17|chr21 (14794929-14794720)
               

               
               287-499, gnl|Mm7|chr16 (75870950-75870741)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-161, gnl|bosTau2|chr1 (14574904-14575064)
               

               
               4-161, gnl|Hg17|chr21 (14806768-14806600)
               

               
               4-161, gnl|Mm7|chr16 (75876525-75876357)
               


               
               287-499, gnl|bosTau2|chr1 (14582891-14583097)
               

               
               287-499, gnl|Hg17|chr21 (14794929-14794720)
               

               
               287-499, gnl|Mm7|chr16 (75870950-75870741)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.573987)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.573987)

	4-161, gnl\|bosTau2\|chr1 (14574904-14575064)
	4-161, gnl\|Hg17\|chr21 (14806768-14806600)
	4-161, gnl\|Mm7\|chr16 (75876525-75876357)

	287-499, gnl\|bosTau2\|chr1 (14582891-14583097)
	287-499, gnl\|Hg17\|chr21 (14794929-14794720)
	287-499, gnl\|Mm7\|chr16 (75870950-75870741)