Non-Coding RNA Search

Ss1.1-rcbl0_017796.5

Sequence:


               
               GCTCTTTCTTAGTAGTGTTATTTTTTGGCCAGCTTATGTTCACCATTAACTTCCTGTTGA
TAGTTTTTTGCTTTTGTAAGGTTGAAACAGGACAGTGCTGACCACAACCACATTATTTAT
TGCAGAATTACAGTATGCAACTGGACTGCTACACGAATTCTCTAATTTGTCATTCTCAAC
CTTTGAGTTAGTTGGAAGCTAATGAATCAAAAAGGATTGGTTTACAATGAGGTTTTCTTA
GAAAGGATTGGTTTCATGATATATTTGTGAATTAGGGAATAGATGTTAACCCTTACTTTA
CAGATAAGTGGTTTGTACGTGGTTAGTTACAAATAAAATTGGCGCTAGAACCCCAGGCCT
TCCGACCTCTTAATTTAGTTGCTGCTAAATGTATAAAACCCTTGCTTACAGAGTGAGTGA
TACAACTAGCAGTGTTGAAATCCCTTCATCACAGGAAAGCACTTTTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTCTTTCTTAGTAGTGTTATTTTTTGGCCAGCTTATGTTCACCATTAACTTCCTGTTGA
TAGTTTTTTGCTTTTGTAAGGTTGAAACAGGACAGTGCTGACCACAACCACATTATTTAT
TGCAGAATTACAGTATGCAACTGGACTGCTACACGAATTCTCTAATTTGTCATTCTCAAC
CTTTGAGTTAGTTGGAAGCTAATGAATCAAAAAGGATTGGTTTACAATGAGGTTTTCTTA
GAAAGGATTGGTTTCATGATATATTTGTGAATTAGGGAATAGATGTTAACCCTTACTTTA
CAGATAAGTGGTTTGTACGTGGTTAGTTACAAATAAAATTGGCGCTAGAACCCCAGGCCT
TCCGACCTCTTAATTTAGTTGCTGCTAAATGTATAAAACCCTTGCTTACAGAGTGAGTGA
TACAACTAGCAGTGTTGAAATCCCTTCATCACAGGAAAGCACTTTTGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-419, gnl|bosTau2|chr12 (3028448-3028028)
               

               
               1-419, gnl|Hg17|chr13 (40600033-40599636)
               

               
               1-419, gnl|Mm7|chr14 (74111379-74111790)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-419, gnl|bosTau2|chr12 (3028448-3028028)
               

               
               1-419, gnl|Hg17|chr13 (40600033-40599636)
               

               
               1-419, gnl|Mm7|chr14 (74111379-74111790)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cbl (0.229595)
               

               
               eru (0.120048)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.229595)
               

               
               eru (0.120048)

	1-419, gnl\|bosTau2\|chr12 (3028448-3028028)
	1-419, gnl\|Hg17\|chr13 (40600033-40599636)
	1-419, gnl\|Mm7\|chr14 (74111379-74111790)