Non-Coding RNA Search

Ss1.1-rcbl0_018973.5

Sequence:


               
               AATTCAGCACCACTAAACCAGCCTTACAACAAATACTAAAGGAACTTCTCTAGGCAGAAA
TGAAAAGATAGACAGCAGCAGGAAACAAAAATTCCACAAATGACAAGCTCACCAGTAAAT
GTGTATATATACAGTAAAGATATGAAATCATCCATGCATAAGTATACCACCAAAATCAGA
ATTCATGAGAAGAGGTGTGTACAAATGCAGGACACTGGAGATGAACTTGCAGTTAAGAGA
GCAACAACTTAATACAATCTCATATACATATAGACTCATATCAAAACTTCAGAATAACTG
CAAACTAAAAATCTACAATTGATATACAAAAAAAGAAAAATCAACACAAATACAACACTA
AAGATAGTCATCAAACCACAAGAGGAGAGAACAAGAGAAGAAGAGAAGAAAAAAGAGCAA
CAAAAACAAATCCAAGGCAATTAATAAAATGGCAATAAGAACATACACATCAATAATTAC
CTTAAATGTTAATGGACTAAACGCCCCAACCAAAAGACATAGACTGGCTGAATGGATACA
ATCAAGACACATATATATCCTGTCTTCAAGGGACCCACTTCACTCCTAAGGACACAGATA
TAGAAAGGGAGAGAATGGAATAAAATATTCCATGCAAATGGGAATCAAAAGAAAGCTAGA
GTAGCAATACTCATATCAGACAAAATAGACTTTAAAATGAAGAATATTTTAAGGGACAAG
GAAGGTCACTAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTCAGCACCACTAAACCAGCCTTACAACAAATACTAAAGGAACTTCTCTAGGCAGAAA
TGAAAAGATAGACAGCAGCAGGAAACAAAAATTCCACAAATGACAAGCTCACCAGTAAAT
GTGTATATATACAGTAAAGATATGAAATCATCCATGCATAAGTATACCACCAAAATCAGA
ATTCATGAGAAGAGGTGTGTACAAATGCAGGACACTGGAGATGAACTTGCAGTTAAGAGA
GCAACAACTTAATACAATCTCATATACATATAGACTCATATCAAAACTTCAGAATAACTG
CAAACTAAAAATCTACAATTGATATACAAAAAAAGAAAAATCAACACAAATACAACACTA
AAGATAGTCATCAAACCACAAGAGGAGAGAACAAGAGAAGAAGAGAAGAAAAAAGAGCAA
CAAAAACAAATCCAAGGCAATTAATAAAATGGCAATAAGAACATACACATCAATAATTAC
CTTAAATGTTAATGGACTAAACGCCCCAACCAAAAGACATAGACTGGCTGAATGGATACA
ATCAAGACACATATATATCCTGTCTTCAAGGGACCCACTTCACTCCTAAGGACACAGATA
TAGAAAGGGAGAGAATGGAATAAAATATTCCATGCAAATGGGAATCAAAAGAAAGCTAGA
GTAGCAATACTCATATCAGACAAAATAGACTTTAAAATGAAGAATATTTTAAGGGACAAG
GAAGGTCACTAC

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               1-383, gnl|bosTau2|chr1 (94253166-94253546)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-383, gnl|bosTau2|chr1 (94253166-94253546)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               cbl (0.229595)
               

               
               csk (0.140746)
               

               
               kid (0.129735)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.229595)
               

               
               csk (0.140746)
               

               
               kid (0.129735)