Non-Coding RNA Search

Ss1.1-rcbl0_019633.5

Sequence:


               
               TACAGCTGGTTACAGAGGAAAAGGCCTCGATTCAGCAAGAGCTAACACGCTGAGGAATCT
ATTTGGAACCTTTCAAAGACTCCTCTGCCTACCGCCATCTGGCATCCAATGTAGGAATAC
GGAAAACTTCATTTAAAAGGAGCAAGAAGTAAATGAGACCGAACTGGGAATGTTTACGTC
TCTGAAACTCTGCACTGGAAAGCAAAACAAAATTGCTAACTTTAGCTTAAACATTCTGGA
GTATAAAGAAACTTTCATTTCAGAATACTCATCTTGACTTCTGAAACAGAAGTTTACCAG
ACCAATCGTTTTATTCTGTCTCTGAACTCAGCTTTTACTTCAAATGTATAATCCAATGGG
TTGGCTTCATTGACTGCGTTTTTTAAACTGAGCCTTGGAATCACGGATTTTTCTGAAGAC
TAGAAAACGAAAATACCTTCTTGTTGAAGAACCAAGTGGAAACGTTACAGCAACAAATTC
CATGTGTCTTTGGAAGAAAAAGGAAATACTTATAAAACCACGCAAAGATCCAAAGATTTG
CAAATACGGTGGAGGTTATAAAGTGGTCACAATCTGAATACCAAAGGAGACGGCAGCTGA
CCAAAGGACTTCGACCCGAAAACTGGACGTGCTTTATAATGGTAAGCAGTAACAGCTCCC
ACTGCGACTACG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACAGCTGGTTACAGAGGAAAAGGCCTCGATTCAGCAAGAGCTAACACGCTGAGGAATCT
ATTTGGAACCTTTCAAAGACTCCTCTGCCTACCGCCATCTGGCATCCAATGTAGGAATAC
GGAAAACTTCATTTAAAAGGAGCAAGAAGTAAATGAGACCGAACTGGGAATGTTTACGTC
TCTGAAACTCTGCACTGGAAAGCAAAACAAAATTGCTAACTTTAGCTTAAACATTCTGGA
GTATAAAGAAACTTTCATTTCAGAATACTCATCTTGACTTCTGAAACAGAAGTTTACCAG
ACCAATCGTTTTATTCTGTCTCTGAACTCAGCTTTTACTTCAAATGTATAATCCAATGGG
TTGGCTTCATTGACTGCGTTTTTTAAACTGAGCCTTGGAATCACGGATTTTTCTGAAGAC
TAGAAAACGAAAATACCTTCTTGTTGAAGAACCAAGTGGAAACGTTACAGCAACAAATTC
CATGTGTCTTTGGAAGAAAAAGGAAATACTTATAAAACCACGCAAAGATCCAAAGATTTG
CAAATACGGTGGAGGTTATAAAGTGGTCACAATCTGAATACCAAAGGAGACGGCAGCTGA
CCAAAGGACTTCGACCCGAAAACTGGACGTGCTTTATAATGGTAAGCAGTAACAGCTCCC
ACTGCGACTACG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               2-665, gnl|bosTau2|chr12 (10194603-10193935)
               

               
               2-665, gnl|Hg17|chr13 (47885230-47884534)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-665, gnl|bosTau2|chr12 (10194603-10193935)
               

               
               2-665, gnl|Hg17|chr13 (47885230-47884534)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               cbl (1.14797)
               

               
               ova (0.258264)
               

               
               mas (0.210305)
               

               
               spl (0.143184)
               

               
               ese (0.126502)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (1.14797)
               

               
               ova (0.258264)
               

               
               mas (0.210305)
               

               
               spl (0.143184)
               

               
               ese (0.126502)

	2-665, gnl\|bosTau2\|chr12 (10194603-10193935)
	2-665, gnl\|Hg17\|chr13 (47885230-47884534)

	cbl (1.14797)
	ova (0.258264)
	mas (0.210305)
	spl (0.143184)
	ese (0.126502)