Non-Coding RNA Search

Ss1.1-rcbl0_019982.5

Sequence:


               
               TTCCATATGATGCAGGTGAGGACCTAAAAAGAAAAGAAAAAAACAGCAGCAACAACAAAT
TTACTTTCAGTTCTTTGGCTCTGAATTTTTTGTTTGTTTGTTTTTACAGTTCTTAAATTT
GAGTCTGAGGTCCAAACATTTCATTGAGTATTTTATGGGTTTGGGTGATAATGGAATATT
CTGTAAGATAAAACAGATAATCCTAGTGTGATTTAATTTATATTTATCCATCTGCCATTT
TTCTGTTTCTCTAACACTTATCTTCTCCCCAGTTTTGAAAAGGAAGTCTTTCCTCTCTCT
CTTACTTAGCCCTGCCTCAGATAATTTTTCTTTGAACTACTCTTGTCAGCAGAAAAATTT
AATATGAAATAATTCTATATTTCTAAGACAAGATCAACACAATAGTTCTTTACGTTGAAC
TGAGTGAGGTGAATATGTACTTGAAAATATTGTATTTTTTTAATGTGTGAACTTATTTTT
TTAAATCATGAGAAGGACTCTCTGATTTGAAAATAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCCATATGATGCAGGTGAGGACCTAAAAAGAAAAGAAAAAAACAGCAGCAACAACAAAT
TTACTTTCAGTTCTTTGGCTCTGAATTTTTTGTTTGTTTGTTTTTACAGTTCTTAAATTT
GAGTCTGAGGTCCAAACATTTCATTGAGTATTTTATGGGTTTGGGTGATAATGGAATATT
CTGTAAGATAAAACAGATAATCCTAGTGTGATTTAATTTATATTTATCCATCTGCCATTT
TTCTGTTTCTCTAACACTTATCTTCTCCCCAGTTTTGAAAAGGAAGTCTTTCCTCTCTCT
CTTACTTAGCCCTGCCTCAGATAATTTTTCTTTGAACTACTCTTGTCAGCAGAAAAATTT
AATATGAAATAATTCTATATTTCTAAGACAAGATCAACACAATAGTTCTTTACGTTGAAC
TGAGTGAGGTGAATATGTACTTGAAAATATTGTATTTTTTTAATGTGTGAACTTATTTTT
TTAAATCATGAGAAGGACTCTCTGATTTGAAAATAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               52-452, gnl|bosTau2|chr8 (4965341-4964952)
               

               
               52-452, gnl|Hg17|chr8 (28484474-28484856)
               

               
               52-452, gnl|Mm7|chr14 (60055609-60055265)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               52-452, gnl|bosTau2|chr8 (4965341-4964952)
               

               
               52-452, gnl|Hg17|chr8 (28484474-28484856)
               

               
               52-452, gnl|Mm7|chr14 (60055609-60055265)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cbl (0.344392)
               

               
               ski (0.146735)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.344392)
               

               
               ski (0.146735)

	52-452, gnl\|bosTau2\|chr8 (4965341-4964952)
	52-452, gnl\|Hg17\|chr8 (28484474-28484856)
	52-452, gnl\|Mm7\|chr14 (60055609-60055265)