Non-Coding RNA Search

Ss1.1-rcbl0_020095.5

Sequence:


               
               CTCATATCTGATTCTAATTTATTTAGAAAGAAAAAAAACTAAAATGTATACTCATTTGCA
AGTATCATGTTATAAATTCTGTGCTTATTTCTTTTGGTATAAAAGGTGAGAACAAAGGTC
ATACACCATTAAGGATTGCTATTTAGGAAGTATTTACGAATCGTCTGTTTTCTTATGTTG
TAAATAATTGATGTGCCACTTATTTCTGCAAAAAATAGACTTGAAGTGGTTGGGATATTA
ATCATAGTGATAGGATTCACTTAAAACATTGATCTGTTTTGACTTGTGCCTCTGAACTCA
AGACCAGACTGAGGTTAATACTGCTATGTATGGTAGGACCAAGGTTCAGTACCTTAGTTA
GTGTTGTGTGACCAGATATTTGAAAAACTTCACTTAGGACAAGAGAAAACAGTAATAACA
TATATATAACCTCGTTCTATAGAATACTTTAAGGTAAGATACTTTTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCATATCTGATTCTAATTTATTTAGAAAGAAAAAAAACTAAAATGTATACTCATTTGCA
AGTATCATGTTATAAATTCTGTGCTTATTTCTTTTGGTATAAAAGGTGAGAACAAAGGTC
ATACACCATTAAGGATTGCTATTTAGGAAGTATTTACGAATCGTCTGTTTTCTTATGTTG
TAAATAATTGATGTGCCACTTATTTCTGCAAAAAATAGACTTGAAGTGGTTGGGATATTA
ATCATAGTGATAGGATTCACTTAAAACATTGATCTGTTTTGACTTGTGCCTCTGAACTCA
AGACCAGACTGAGGTTAATACTGCTATGTATGGTAGGACCAAGGTTCAGTACCTTAGTTA
GTGTTGTGTGACCAGATATTTGAAAAACTTCACTTAGGACAAGAGAAAACAGTAATAACA
TATATATAACCTCGTTCTATAGAATACTTTAAGGTAAGATACTTTTGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-405, gnl|bosTau2|chr20 (17509022-17509418)
               

               
               1-405, gnl|Hg17|chr5 (50174942-50175342)
               

               
               1-405, gnl|Mm7|chr13 (114062225-114061850)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-405, gnl|bosTau2|chr20 (17509022-17509418)
               

               
               1-405, gnl|Hg17|chr5 (50174942-50175342)
               

               
               1-405, gnl|Mm7|chr13 (114062225-114061850)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.229595)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.229595)

	1-405, gnl\|bosTau2\|chr20 (17509022-17509418)
	1-405, gnl\|Hg17\|chr5 (50174942-50175342)
	1-405, gnl\|Mm7\|chr13 (114062225-114061850)