Ss1.1-rcbl0_020861.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGAATAAAGCAGAAGCAGTCGCAGCTCCAGGAGCTCATCTTGCAGCAAATCGCCTTCAA GAACCTGGTGCAGAGGAACCGCCAGGCGGAGCAGCAGGCCAGCCGGCCGCCCCCGCCCAA CTCCGTCATCCACCTGCCCTTCATCATCGTCAACACCAGCAAGAGGACCGTCATCGACTG CAGCATCTCCAACGACAAGTTCGAGTACCTGTTTAACTTTGACAACACGTTTGAGATCCA CGACGACATCGAGGTGCTGAAGCGCATGGGCATGGCCTGCGGGCTGGAGTCCGGGAGCTG CTCCGCCGAGGACCTGAAGGTGGCGCGGAGCTTGGTACCAAAGGCGCTGGAGCCCTACGT GACAGAAATGGCTCAGGGACCACTCGGTGTCTTTGTCACGTCAGCAGTTTCGACTTCGAA TGGCACAAGGCTCTCTGCCAGCGACCTGGCCAACGGCGCGGATGGGACGCTGGCCACGAG CTCCAGCGGGTCACAGTACAGTGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGAATAAAGCAGAAGCAGTCGCAGCTCCAGGAGCTCATCTTGCAGCAAATCGCCTTCAA GAACCTGGTGCAGAGGAACCGCCAGGCGGAGCAGCAGGCCAGCCGGCCGCCCCCGCCCAA CTCCGTCATCCACCTGCCCTTCATCATCGTCAACACCAGCAAGAGGACCGTCATCGACTG CAGCATCTCCAACGACAAGTTCGAGTACCTGTTTAACTTTGACAACACGTTTGAGATCCA CGACGACATCGAGGTGCTGAAGCGCATGGGCATGGCCTGCGGGCTGGAGTCCGGGAGCTG CTCCGCCGAGGACCTGAAGGTGGCGCGGAGCTTGGTACCAAAGGCGCTGGAGCCCTACGT GACAGAAATGGCTCAGGGACCACTCGGTGTCTTTGTCACGTCAGCAGTTTCGACTTCGAA TGGCACAAGGCTCTCTGCCAGCGACCTGGCCAACGGCGCGGATGGGACGCTGGCCACGAG CTCCAGCGGGTCACAGTACAGTGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 195-370, gnl|bosTau2|chr1 (79359298-79359473) | |
| 195-370, gnl|Hg17|chr3 (143161384-143161209) | |
| 195-370, gnl|Mm7|chr9 (95951791-95951966) | |
| 196-365, gnl|bosTau2|chr12 (47719686-47719517) | |
| 196-365, gnl|canFam2|chr22 (63851075-63850967) | |
| 196-365, gnl|danRer3|chrNA (43207000-43206885) | |
| 196-365, gnl|dasNov1|scaffold_103424 (4380-4265) | |
| 196-365, gnl|echTel1|scaffold_277224 (18956-19047) | |
| 196-365, gnl|fr1|chrUn (214388618-214388733) | |
| 196-365, gnl|galGal2|chr1 (130316740-130316855) | |
| 196-365, gnl|Hg17|chr13 (113338847-113339016) | |
| 196-365, gnl|hg17|chr15 (77638880-77638977) | |
| 196-365, gnl|loxAfr1|scaffold_1231 (40804-40689) | |
| 196-365, gnl|Mm7|chr8 (13347153-13347322) | |
| 196-365, gnl|mm7|chr9 (4896193-4896078) | |
| 196-365, gnl|monDom2|scaffold_11 (31537064-31537179) | |
| 196-365, gnl|oryCun1|scaffold_90217 (471-356) | |
| 196-365, gnl|panTro1|chr16 (78348265-78348362) | |
| 196-365, gnl|rheMac2|chr7 (58678244-58678359) | |
| 196-365, gnl|rn3|chr16 (81023118-81023233) | |
| 196-365, gnl|tetNig1|chr2 (9179264-9179374) | |
| 196-365, gnl|xenTro1|scaffold_1119 (98548-98433) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 195-370, gnl|bosTau2|chr1 (79359298-79359473) | |
| 195-370, gnl|Hg17|chr3 (143161384-143161209) | |
| 195-370, gnl|Mm7|chr9 (95951791-95951966) | |
| 196-365, gnl|bosTau2|chr12 (47719686-47719517) | |
| 196-365, gnl|canFam2|chr22 (63851075-63850967) | |
| 196-365, gnl|danRer3|chrNA (43207000-43206885) | |
| 196-365, gnl|dasNov1|scaffold_103424 (4380-4265) | |
| 196-365, gnl|echTel1|scaffold_277224 (18956-19047) | |
| 196-365, gnl|fr1|chrUn (214388618-214388733) | |
| 196-365, gnl|galGal2|chr1 (130316740-130316855) | |
| 196-365, gnl|Hg17|chr13 (113338847-113339016) | |
| 196-365, gnl|hg17|chr15 (77638880-77638977) | |
| 196-365, gnl|loxAfr1|scaffold_1231 (40804-40689) | |
| 196-365, gnl|Mm7|chr8 (13347153-13347322) | |
| 196-365, gnl|mm7|chr9 (4896193-4896078) | |
| 196-365, gnl|monDom2|scaffold_11 (31537064-31537179) | |
| 196-365, gnl|oryCun1|scaffold_90217 (471-356) | |
| 196-365, gnl|panTro1|chr16 (78348265-78348362) | |
| 196-365, gnl|rheMac2|chr7 (58678244-58678359) | |
| 196-365, gnl|rn3|chr16 (81023118-81023233) | |
| 196-365, gnl|tetNig1|chr2 (9179264-9179374) | |
| 196-365, gnl|xenTro1|scaffold_1119 (98548-98433) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pty (0.142714) | |
| cbl (0.114797) | |
| eje (0.0988338) |