Non-Coding RNA Search

Ss1.1-rcbl0_020874.5

Sequence:


               
               CTGCTTAGATCATATTTGATTTTGTACTTGCTTTTTACATTCTTTATGAGCTTCTAAACT
GCACTCTTGAATTTAAGCATTTAATTTGTGGGTTGGACACGTTTCTACTCTTTGCAAACA
GTAATTTGTAAAATTGTTCTGAGAGAAATAGTTAAATAGATCCAAAATGATGACACACAG
CTAATAAATTTAATTTGTAATTTAATTTTATTTAGTTATTCAAAATGATTATAAGCTTTT
TCTTTTAGATGCTTTTAAACAGCTTTTAAAACCACATTAAGGTTTTTATTTGACTTTTTA
AAAGCAGTGAAACAGGCTGCTTAAATAAAGATTTTTCCTAAAACATCTATGTGTTTTTAT
AAATTGTTTTGTTCCTTTTATTTCTTTAAACTTGTAACTACTGTTTTTCATAGACTGCCA
TCAGTGAGAATTATCAGACAATGTCGGACACTACTTTCAAAGCCTTACGTCGACAGTTGC
CAGTTACACGCACTAAGATTGATTGGAACAAGATCCTTAGCTACAAGATTGGCAAAGAGA
TGCAGAATGCATAAGATCAACATTGCATGACCGGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCTTAGATCATATTTGATTTTGTACTTGCTTTTTACATTCTTTATGAGCTTCTAAACT
GCACTCTTGAATTTAAGCATTTAATTTGTGGGTTGGACACGTTTCTACTCTTTGCAAACA
GTAATTTGTAAAATTGTTCTGAGAGAAATAGTTAAATAGATCCAAAATGATGACACACAG
CTAATAAATTTAATTTGTAATTTAATTTTATTTAGTTATTCAAAATGATTATAAGCTTTT
TCTTTTAGATGCTTTTAAACAGCTTTTAAAACCACATTAAGGTTTTTATTTGACTTTTTA
AAAGCAGTGAAACAGGCTGCTTAAATAAAGATTTTTCCTAAAACATCTATGTGTTTTTAT
AAATTGTTTTGTTCCTTTTATTTCTTTAAACTTGTAACTACTGTTTTTCATAGACTGCCA
TCAGTGAGAATTATCAGACAATGTCGGACACTACTTTCAAAGCCTTACGTCGACAGTTGC
CAGTTACACGCACTAAGATTGATTGGAACAAGATCCTTAGCTACAAGATTGGCAAAGAGA
TGCAGAATGCATAAGATCAACATTGCATGACCGGAT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|13278139|gb|AAH03915.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|13278139|gb|AAH03915.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               414-576, gnl|bosTau2|chr11 (9164354-9164201)
               

               
               414-576, gnl|Hg17|chr15 (87333894-87333732)
               

               
               414-576, gnl|Mm7|chr6 (17605751-17605912)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               414-576, gnl|bosTau2|chr11 (9164354-9164201)
               

               
               414-576, gnl|Hg17|chr15 (87333894-87333732)
               

               
               414-576, gnl|Mm7|chr6 (17605751-17605912)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.45919)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.45919)

	414-576, gnl\|bosTau2\|chr11 (9164354-9164201)
	414-576, gnl\|Hg17\|chr15 (87333894-87333732)
	414-576, gnl\|Mm7\|chr6 (17605751-17605912)