Ss1.1-rcbl0_021306.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACTGACTATACCACTGGCAGAGTTGGAGCCCCTCTTATTTGCTGTGAAATTAAGCTAAAA GACTGGCAAGAAGGCGGTTATACAGTTCACGACAAGCCAAACCCCAGAGGTGAAATTGTA ATCGGTGGACAGAATATCTCCATGGGCATATTTCAAAAATGAAGAGAAAACGGCTGAAGA TTATTCTGTGGATGAAAATGGCCAAAGGTGGTTTTGTACTGGTGACATTGGAGAGTTCCA TCCCGATGGGTGTTTACAGATTATAGATCGTAAGAAAGATCTGGTGAAGTTACAAGCAGG AGAATATGTTTCTCTTGGGAAAGTAGAAGCTGCACTGAAGAACTGTCCACTTATCGATAA CATCTGTGCTTTGGGCAAGAGTGACCAGTCCTATGTGATAAGCTTTGTGGTTCCTAATCA GCAAAGGTTGACACTTTGGGCCCAACAGAAAGGAGTGGAAGGAACTTGGGTTGATATCTG CAATAACCCTGCCATGGAAGCTGAAATACTGAAAGAGATTAGAGAACCTCCAAATACCAT GAAANTGGAGCGATTTGAAATTCCAATCAAGGTTCGCTTAAGCCCAGAGCCCTGGACCCC TGAAACTGGTTTGGTCACTGATGCTTTCAAACTGAAAAGGAAGGAACTGAAGAACCATTA CCTCAAAGACATTGAGCGAATGTATGGGGGCAAATAAAGTGCCACTCTCTTATTTATGGT TATGCAGGAGGTGGCCTGGTGGTTTATCGGTTCTAGAGTTTTAAGCCTTGTTGAGCTGTC TGTTAGAATGTAAGGTGTATCATTCTAAAGACATGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACTGACTATACCACTGGCAGAGTTGGAGCCCCTCTTATTTGCTGTGAAATTAAGCTAAAA GACTGGCAAGAAGGCGGTTATACAGTTCACGACAAGCCAAACCCCAGAGGTGAAATTGTA ATCGGTGGACAGAATATCTCCATGGGCATATTTCAAAAATGAAGAGAAAACGGCTGAAGA TTATTCTGTGGATGAAAATGGCCAAAGGTGGTTTTGTACTGGTGACATTGGAGAGTTCCA TCCCGATGGGTGTTTACAGATTATAGATCGTAAGAAAGATCTGGTGAAGTTACAAGCAGG AGAATATGTTTCTCTTGGGAAAGTAGAAGCTGCACTGAAGAACTGTCCACTTATCGATAA CATCTGTGCTTTGGGCAAGAGTGACCAGTCCTATGTGATAAGCTTTGTGGTTCCTAATCA GCAAAGGTTGACACTTTGGGCCCAACAGAAAGGAGTGGAAGGAACTTGGGTTGATATCTG CAATAACCCTGCCATGGAAGCTGAAATACTGAAAGAGATTAGAGAACCTCCAAATACCAT GAAANTGGAGCGATTTGAAATTCCAATCAAGGTTCGCTTAAGCCCAGAGCCCTGGACCCC TGAAACTGGTTTGGTCACTGATGCTTTCAAACTGAAAAGGAAGGAACTGAAGAACCATTA CCTCAAAGACATTGAGCGAATGTATGGGGGCAAATAAAGTGCCACTCTCTTATTTATGGT TATGCAGGAGGTGGCCTGGTGGTTTATCGGTTCTAGAGTTTTAAGCCTTGTTGAGCTGTC TGTTAGAATGTAAGGTGTATCATTCTAAAGACATGA |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 72-269, gnl|bosTau2|chrX (17155275-17155471) | |
| 72-269, gnl|canFam2|chrX (85951256-85951492) | |
| 72-269, gnl|danRer3|chr14 (28002949-28003184) | |
| 72-269, gnl|dasNov1|scaffold_49799 (6084-6317) | |
| 72-269, gnl|echTel1|scaffold_278544 (46182-46418) | |
| 72-269, gnl|fr1|chrUn (74274492-74274276) | |
| 72-269, gnl|galGal2|chr4 (13540060-13539814) | |
| 72-269, gnl|hg17|chrX (108712567-108712803) | |
| 72-269, gnl|Hg17|chrX (108712778-108712582) | |
| 72-269, gnl|loxAfr1|scaffold_39386 (41007-40761) | |
| 72-269, gnl|mm7|chrX (136996491-136996729) | |
| 72-269, gnl|Mm7|chrX (136996702-136996506) | |
| 72-269, gnl|monDom2|scaffold_131 (332947-333183) | |
| 72-269, gnl|oryCun1|scaffold_178246 (5922-5685) | |
| 72-269, gnl|panTro1|chrX (112406026-112406262) | |
| 72-269, gnl|rheMac2|chrX (108374281-108374517) | |
| 72-269, gnl|rn3|chrX (36273715-36273485) | |
| 72-269, gnl|tetNig1|chr1 (3630731-3630530) | |
| 72-269, gnl|xenTro1|scaffold_209 (1084737-1084506) | |
| 380-539, gnl|bosTau2|chrX (17159485-17159644) | |
| 380-539, gnl|canFam2|chrX (85945761-85945941) | |
| 380-539, gnl|danRer3|chr14 (28001538-28001704) | |
| 380-539, gnl|dasNov1|scaffold_49799 (2662-2842) | |
| 380-539, gnl|echTel1|scaffold_278544 (43005-43183) | |
| 380-539, gnl|fr1|chrUn (74275472-74275306) | |
| 380-539, gnl|galGal2|chr4 (13541567-13541401) | |
| 380-539, gnl|hg17|chrX (108708722-108708902) | |
| 380-539, gnl|Hg17|chrX (108708887-108708728) | |
| 380-539, gnl|loxAfr1|scaffold_122008 (4247-4427) | |
| 380-539, gnl|mm7|chrX (136992287-136992468) | |
| 380-539, gnl|Mm7|chrX (136992452-136992293) | |
| 380-539, gnl|monDom2|scaffold_131 (330794-330974) | |
| 380-539, gnl|oryCun1|scaffold_190794 (21390-21571) | |
| 380-539, gnl|panTro1|chrX (112401454-112401634) | |
| 380-539, gnl|rheMac2|chrX (108370486-108370666) | |
| 380-539, gnl|rn3|chrX (36277721-36277539) | |
| 380-539, gnl|tetNig1|chr1 (3631455-3631289) | |
| 380-539, gnl|xenTro1|scaffold_209 (1088291-1088118) | |
| 540-814, gnl|bosTau2|chrX (17166191-17166471) | |
| 540-814, gnl|Hg17|chrX (108693560-108693289) | |
| 540-814, gnl|Mm7|chrX (136985151-136984879) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 72-269, gnl|bosTau2|chrX (17155275-17155471) | |
| 72-269, gnl|canFam2|chrX (85951256-85951492) | |
| 72-269, gnl|danRer3|chr14 (28002949-28003184) | |
| 72-269, gnl|dasNov1|scaffold_49799 (6084-6317) | |
| 72-269, gnl|echTel1|scaffold_278544 (46182-46418) | |
| 72-269, gnl|fr1|chrUn (74274492-74274276) | |
| 72-269, gnl|galGal2|chr4 (13540060-13539814) | |
| 72-269, gnl|hg17|chrX (108712567-108712803) | |
| 72-269, gnl|Hg17|chrX (108712778-108712582) | |
| 72-269, gnl|loxAfr1|scaffold_39386 (41007-40761) | |
| 72-269, gnl|mm7|chrX (136996491-136996729) | |
| 72-269, gnl|Mm7|chrX (136996702-136996506) | |
| 72-269, gnl|monDom2|scaffold_131 (332947-333183) | |
| 72-269, gnl|oryCun1|scaffold_178246 (5922-5685) | |
| 72-269, gnl|panTro1|chrX (112406026-112406262) | |
| 72-269, gnl|rheMac2|chrX (108374281-108374517) | |
| 72-269, gnl|rn3|chrX (36273715-36273485) | |
| 72-269, gnl|tetNig1|chr1 (3630731-3630530) | |
| 72-269, gnl|xenTro1|scaffold_209 (1084737-1084506) | |
| 380-539, gnl|bosTau2|chrX (17159485-17159644) | |
| 380-539, gnl|canFam2|chrX (85945761-85945941) | |
| 380-539, gnl|danRer3|chr14 (28001538-28001704) | |
| 380-539, gnl|dasNov1|scaffold_49799 (2662-2842) | |
| 380-539, gnl|echTel1|scaffold_278544 (43005-43183) | |
| 380-539, gnl|fr1|chrUn (74275472-74275306) | |
| 380-539, gnl|galGal2|chr4 (13541567-13541401) | |
| 380-539, gnl|hg17|chrX (108708722-108708902) | |
| 380-539, gnl|Hg17|chrX (108708887-108708728) | |
| 380-539, gnl|loxAfr1|scaffold_122008 (4247-4427) | |
| 380-539, gnl|mm7|chrX (136992287-136992468) | |
| 380-539, gnl|Mm7|chrX (136992452-136992293) | |
| 380-539, gnl|monDom2|scaffold_131 (330794-330974) | |
| 380-539, gnl|oryCun1|scaffold_190794 (21390-21571) | |
| 380-539, gnl|panTro1|chrX (112401454-112401634) | |
| 380-539, gnl|rheMac2|chrX (108370486-108370666) | |
| 380-539, gnl|rn3|chrX (36277721-36277539) | |
| 380-539, gnl|tetNig1|chr1 (3631455-3631289) | |
| 380-539, gnl|xenTro1|scaffold_209 (1088291-1088118) | |
| 540-814, gnl|bosTau2|chrX (17166191-17166471) | |
| 540-814, gnl|Hg17|chrX (108693560-108693289) | |
| 540-814, gnl|Mm7|chrX (136985151-136984879) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbl (0.229595) |