Non-Coding RNA Search

Ss1.1-rcbl0_021461.5

Sequence:


               
               AGAAGTGTCAGGATATCAATCATGAGTCGTTAGTCTAACTGCAGTCTGTCAGTTCACCAG
GACCTTAACATTTATAAGTACTGGTAAAGGGAGAAAACTAACTGCTAAACTGAAAGTTAT
TCTTTACCAGAAATTAGTTCCTCTGACACACATTTTATTTGGGCTGCTTAATGTGTCTGT
AAAGAATTAAATATGAAACAAGATTCAGTGTAGCAGAGTTGGAACTTCTCATACAGCTAA
CTTGACCATGTTCCTTTATCTTCACTTGAGCATGAAATTTTTTAAACTATAAAATAAGTG
CAATAAAAAAATTAAGGGTATGCTTTTTAAAAAAAAATCACTGAACTTTTAGAAATCCCA
CATCTATATCTCTATGCTTGCCTTTTTATAAAGTTATTGCAAAGTTTACCAGTTACTGCA
AAGAAAGAAAACTGAAGGGAAAAAACTAGACGGAATCTTACCTTTTTCAGACCTAAGAGA
AATTTTCACTAGACACTTGGAGAAGTCATACCAGAATTCTAATTACTTTCCCATATTGGG
CAGGTTACAGGGGAACTAGCCAACCAAATGATGACCTAGCAAATTTAACAAGGGGGTGGG
GGAGAGTAAACTATTTTTCAGTAGATTTGCACTTTAAAATGAACTGGATGTTGGTGGAAA
GTACTCTCAAAGGGCAGATGGTGAAATACCTAGCCTGCCTGTGGATAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAAGTGTCAGGATATCAATCATGAGTCGTTAGTCTAACTGCAGTCTGTCAGTTCACCAG
GACCTTAACATTTATAAGTACTGGTAAAGGGAGAAAACTAACTGCTAAACTGAAAGTTAT
TCTTTACCAGAAATTAGTTCCTCTGACACACATTTTATTTGGGCTGCTTAATGTGTCTGT
AAAGAATTAAATATGAAACAAGATTCAGTGTAGCAGAGTTGGAACTTCTCATACAGCTAA
CTTGACCATGTTCCTTTATCTTCACTTGAGCATGAAATTTTTTAAACTATAAAATAAGTG
CAATAAAAAAATTAAGGGTATGCTTTTTAAAAAAAAATCACTGAACTTTTAGAAATCCCA
CATCTATATCTCTATGCTTGCCTTTTTATAAAGTTATTGCAAAGTTTACCAGTTACTGCA
AAGAAAGAAAACTGAAGGGAAAAAACTAGACGGAATCTTACCTTTTTCAGACCTAAGAGA
AATTTTCACTAGACACTTGGAGAAGTCATACCAGAATTCTAATTACTTTCCCATATTGGG
CAGGTTACAGGGGAACTAGCCAACCAAATGATGACCTAGCAAATTTAACAAGGGGGTGGG
GGAGAGTAAACTATTTTTCAGTAGATTTGCACTTTAAAATGAACTGGATGTTGGTGGAAA
GTACTCTCAAAGGGCAGATGGTGAAATACCTAGCCTGCCTGTGGATAT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-708, gnl|bosTau2|chr10 (60273838-60274532)
               

               
               2-708, gnl|Hg17|chr14 (73237069-73237788)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-708, gnl|bosTau2|chr10 (60273838-60274532)
               

               
               2-708, gnl|Hg17|chr14 (73237069-73237788)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cbl (1.83676)
               

               
               fhi (0.169578)
               

               
               spc (0.113366)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (1.83676)
               

               
               fhi (0.169578)
               

               
               spc (0.113366)

	2-708, gnl\|bosTau2\|chr10 (60273838-60274532)
	2-708, gnl\|Hg17\|chr14 (73237069-73237788)