Non-Coding RNA Search

Ss1.1-rcbl0_021755.5

Sequence:


               
               CTGCTTTGAGACGTGCAGGAAGGTTCGACCGAGAAATATGCCTGGGTATCCCAGATGAAG
CATCCAGGGAAAGAATTCTTCAGACCTTGTGCAGAAAACTAAGACTTCCTGAAACTTTTC
GTTTTCGTCACTTAGCACACCTGACACCGGGCTTTGTTGGTGCTGACCTGATGGCCCTCT
GCCGAGAGGCAGCCGTGTGTGCCGTCAACAGGGTCTTAATGAAGCAGCAGGAGCAGCAGA
AGGAAAATCCTGAGAATGAAGGCTTGCCCTCCAAAGGAGGCCAGGAAGAAGGGATTGGAA
CAGAACCCACTTCTAAAGGACAGGCGCTTTCTACACAGGATGAACTGCAGAGATTGCTGG
GGTTGCTAAGGAACCAAGATCCCCTCTCAGAGGAGCAGCTGCAAGGGCTGTGCATTGAAT
TGAATGATTTCATTGTTGCTCTGTCTTCAGTCCAACCCTCTGCTAAAAGGGAAGGCTTTG
TCACTGTCCCTAATGTGACATGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCTTTGAGACGTGCAGGAAGGTTCGACCGAGAAATATGCCTGGGTATCCCAGATGAAG
CATCCAGGGAAAGAATTCTTCAGACCTTGTGCAGAAAACTAAGACTTCCTGAAACTTTTC
GTTTTCGTCACTTAGCACACCTGACACCGGGCTTTGTTGGTGCTGACCTGATGGCCCTCT
GCCGAGAGGCAGCCGTGTGTGCCGTCAACAGGGTCTTAATGAAGCAGCAGGAGCAGCAGA
AGGAAAATCCTGAGAATGAAGGCTTGCCCTCCAAAGGAGGCCAGGAAGAAGGGATTGGAA
CAGAACCCACTTCTAAAGGACAGGCGCTTTCTACACAGGATGAACTGCAGAGATTGCTGG
GGTTGCTAAGGAACCAAGATCCCCTCTCAGAGGAGCAGCTGCAAGGGCTGTGCATTGAAT
TGAATGATTTCATTGTTGCTCTGTCTTCAGTCCAACCCTCTGCTAAAAGGGAAGGCTTTG
TCACTGTCCCTAATGTGACATGGG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61843385|ref|XP_594810.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61843385|ref|XP_594810.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               72-339, gnl|bosTau2|chr16 (16341485-16341752)
               

               
               72-339, gnl|Hg17|chr1 (220784172-220783905)
               

               
               72-339, gnl|Mm7|chr1 (181097336-181097072)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               72-339, gnl|bosTau2|chr16 (16341485-16341752)
               

               
               72-339, gnl|Hg17|chr1 (220784172-220783905)
               

               
               72-339, gnl|Mm7|chr1 (181097336-181097072)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.229595)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.229595)

	72-339, gnl\|bosTau2\|chr16 (16341485-16341752)
	72-339, gnl\|Hg17\|chr1 (220784172-220783905)
	72-339, gnl\|Mm7\|chr1 (181097336-181097072)