Non-Coding RNA Search

Ss1.1-rcbl0_022143.5

Sequence:


               
               TTTTTTTTTTTTTTTTTTGGCTGA------------------------------------
------------------------------------------------------------
------------------------------------GTGTATTATCTGTATTAGAAATTA
AGCGGTAATTTATAATAGTATCATCTCTTTATTTTAACATTTAGTTTCTATGCCTTGGCA
AATGTCAACTTGGGCTATAATGAAGAACATTGTTGCTAAGGATGGGTTTTCTGGATTATT
TACAGGCCTAATTCCTCGCTTAATTAAAATTGCTCCTGCTTGTGCTATTATGATCAGTAC
ATATGAATTTGGAAAGTCATTTTTCCAGAAACAAAATGCTCGAAGACAGCAGTACTAGAG
CGCTGTTTCAACTTGAAACAACAACCATGATCAATAATAAGATGGAGAATATTAGGCAAG
AGCTTTTTTCACCATTATCTTTCAATCATTTTATGTCTTTCTTATTTATAAGTGAATAGT
AAATTTCTACTTTAGATTTAAATCAAATCCTAGTTTTAAGATAAATTTTTTATCCTAAAT
TTTGAGGTATTGGAAAAGATATTTTAGAAATCGTAACCAATGAACACCCTAGTAAAGAAA
AATTATTCCTTAGCATTGAGAGCAATAATCTCTGAGAGTTGATGCTGATTTCAGTGTAAC
TTTATCCTACTGGGAGTGTGTCAGATACGCCAGAACATTTTGATTGTGTGCTGATTGAAG
TACAGAGTATAGAAGAAAAATTCCCAAGTCTTTATGCACATTTGAATCGTGGACATAGAT
ATTTAGGTATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTGGCTGA------------------------------------
------------------------------------------------------------
------------------------------------GTGTATTATCTGTATTAGAAATTA
AGCGGTAATTTATAATAGTATCATCTCTTTATTTTAACATTTAGTTTCTATGCCTTGGCA
AATGTCAACTTGGGCTATAATGAAGAACATTGTTGCTAAGGATGGGTTTTCTGGATTATT
TACAGGCCTAATTCCTCGCTTAATTAAAATTGCTCCTGCTTGTGCTATTATGATCAGTAC
ATATGAATTTGGAAAGTCATTTTTCCAGAAACAAAATGCTCGAAGACAGCAGTACTAGAG
CGCTGTTTCAACTTGAAACAACAACCATGATCAATAATAAGATGGAGAATATTAGGCAAG
AGCTTTTTTCACCATTATCTTTCAATCATTTTATGTCTTTCTTATTTATAAGTGAATAGT
AAATTTCTACTTTAGATTTAAATCAAATCCTAGTTTTAAGATAAATTTTTTATCCTAAAT
TTTGAGGTATTGGAAAAGATATTTTAGAAATCGTAACCAATGAACACCCTAGTAAAGAAA
AATTATTCCTTAGCATTGAGAGCAATAATCTCTGAGAGTTGATGCTGATTTCAGTGTAAC
TTTATCCTACTGGGAGTGTGTCAGATACGCCAGAACATTTTGATTGTGTGCTGATTGAAG
TACAGAGTATAGAAGAAAAATTCCCAAGTCTTTATGCACATTTGAATCGTGGACATAGAT
ATTTAGGTATTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               167-720, gnl|bosTau2|chr4 (12416833-12417392)
               

               
               167-720, gnl|Hg17|chr7 (87110334-87109783)
               

               
               167-720, gnl|Mm7|chr5 (8490822-8491352)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               167-720, gnl|bosTau2|chr4 (12416833-12417392)
               

               
               167-720, gnl|Hg17|chr7 (87110334-87109783)
               

               
               167-720, gnl|Mm7|chr5 (8490822-8491352)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.229595)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.229595)

	167-720, gnl\|bosTau2\|chr4 (12416833-12417392)
	167-720, gnl\|Hg17\|chr7 (87110334-87109783)
	167-720, gnl\|Mm7\|chr5 (8490822-8491352)