Non-Coding RNA Search

Ss1.1-rcbl0_022668.5

Sequence:


               
               CTGGTGCCTATGTCTCACCACAATCCCATAAACCACTCTCCAAAAAAAAAAAAACAAGAA
AGAAAATGAAAATAGAACTTGAAATATATTTTAGGTGGGAGAAGCACGTGACAATCCTAT
GACAAAGAATTAAAGTAGTGCTGTTTCCCCAGGGGCCACAATACCATCAATCCCCAAACA
GCAGTCACCTCTCATCACCTAACAGCTTGAGGCAGAGGGAGTCAAAGTGCCACTTTTTTG
TTATTCAGATTAAATATCATTTACATTATATACCTTTTTTATTTCACCAGAGACATAAGG
TCAGAATTGATTGAATATGTACTACCTGCATATAATGATTTCTCATTTTTTACAATCATG
TGCTAACGCTGCACAGTAATGGCCTGTGGATGGAGAGACAGATGTACGACCAGTCATTCA
CTACACATTTGCATTAACAAATCATCATTTAATTGAAGCCCATCCAACAAGTTTATGCTA
CTTAAATAAAGTTCCTTTCAATAAAAGATGCCACAATGACACATGGCTGTTAAATATAAG
GAAAAAAATTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGTGCCTATGTCTCACCACAATCCCATAAACCACTCTCCAAAAAAAAAAAAACAAGAA
AGAAAATGAAAATAGAACTTGAAATATATTTTAGGTGGGAGAAGCACGTGACAATCCTAT
GACAAAGAATTAAAGTAGTGCTGTTTCCCCAGGGGCCACAATACCATCAATCCCCAAACA
GCAGTCACCTCTCATCACCTAACAGCTTGAGGCAGAGGGAGTCAAAGTGCCACTTTTTTG
TTATTCAGATTAAATATCATTTACATTATATACCTTTTTTATTTCACCAGAGACATAAGG
TCAGAATTGATTGAATATGTACTACCTGCATATAATGATTTCTCATTTTTTACAATCATG
TGCTAACGCTGCACAGTAATGGCCTGTGGATGGAGAGACAGATGTACGACCAGTCATTCA
CTACACATTTGCATTAACAAATCATCATTTAATTGAAGCCCATCCAACAAGTTTATGCTA
CTTAAATAAAGTTCCTTTCAATAAAAGATGCCACAATGACACATGGCTGTTAAATATAAG
GAAAAAAATTTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               50-544, gnl|bosTau2|chr1 (100962899-100963395)
               

               
               50-544, gnl|Hg17|chr3 (17366721-17367231)
               

               
               50-544, gnl|Mm7|chr17 (49053024-49053437)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               50-544, gnl|bosTau2|chr1 (100962899-100963395)
               

               
               50-544, gnl|Hg17|chr3 (17366721-17367231)
               

               
               50-544, gnl|Mm7|chr17 (49053024-49053437)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.45919)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.45919)

	50-544, gnl\|bosTau2\|chr1 (100962899-100963395)
	50-544, gnl\|Hg17\|chr3 (17366721-17367231)
	50-544, gnl\|Mm7\|chr17 (49053024-49053437)