Non-Coding RNA Search

Ss1.1-rcbl0_022918.5

Sequence:


               
               GATTGAGGCTTGTGCCTGTCAGTCCTATTTTGATGCTATCGTTGTAGGTGGTGAGCAGAA
AGAAGAGAAACCGGCACCTTCCATATTTTATTACTCCTGTGATCTCCTGGGAGTACAGCC
CGGGGACTGTGTGATGGTTGGTGACACACTAGAAACCGATATACAAGGAGGCCTCAATGC
AGGACTGAAAGCAACAGTCTGGATAAATAAAAATGGAATGGTGCCATTGAAGTCATCCCC
CGTGCCACACTATATAGTTTCCTCTGTCCTAGAGTTACCTGCTCTCCTACAGAGTATAGA
CTGCAAAGTCGGCGTGTCAGCTTAAAGCACAGAAAAGGGGCATGCTTACAAATTTTAGGG
TCAAATTACAGGGTGTGAACTAAGAAAAGTTAAGGCATTCTGTATACTGTGACCCAGTAC
TAGGAATAATTATACTTGTCATTTAATGACCAACCGACCATTGACTGGTATTTATATCTA
AAAACCCAGAATACATTAATGCAAGTTCCTTTTAGTATTGTGATCCAGAAAACTTGGGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATTGAGGCTTGTGCCTGTCAGTCCTATTTTGATGCTATCGTTGTAGGTGGTGAGCAGAA
AGAAGAGAAACCGGCACCTTCCATATTTTATTACTCCTGTGATCTCCTGGGAGTACAGCC
CGGGGACTGTGTGATGGTTGGTGACACACTAGAAACCGATATACAAGGAGGCCTCAATGC
AGGACTGAAAGCAACAGTCTGGATAAATAAAAATGGAATGGTGCCATTGAAGTCATCCCC
CGTGCCACACTATATAGTTTCCTCTGTCCTAGAGTTACCTGCTCTCCTACAGAGTATAGA
CTGCAAAGTCGGCGTGTCAGCTTAAAGCACAGAAAAGGGGCATGCTTACAAATTTTAGGG
TCAAATTACAGGGTGTGAACTAAGAAAAGTTAAGGCATTCTGTATACTGTGACCCAGTAC
TAGGAATAATTATACTTGTCATTTAATGACCAACCGACCATTGACTGGTATTTATATCTA
AAAACCCAGAATACATTAATGCAAGTTCCTTTTAGTATTGTGATCCAGAAAACTTGGGGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-535, gnl|bosTau2|chr13 (4829022-4828489)
               

               
               1-535, gnl|Hg17|chr20 (25544885-25544314)
               

               
               1-535, gnl|Mm7|chr2 (150771441-150770899)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-535, gnl|bosTau2|chr13 (4829022-4828489)
               

               
               1-535, gnl|Hg17|chr20 (25544885-25544314)
               

               
               1-535, gnl|Mm7|chr2 (150771441-150770899)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.573987)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.573987)

	1-535, gnl\|bosTau2\|chr13 (4829022-4828489)
	1-535, gnl\|Hg17\|chr20 (25544885-25544314)
	1-535, gnl\|Mm7\|chr2 (150771441-150770899)