Non-Coding RNA Search

Ss1.1-rcbl0_022926.5

Sequence:


               
               GTCATTCATGTTTTCTGGTATTGAAAAATTCTGGAAGTTCCACAAAACAATCCTTAATAA
TAAGGATTCATACTAAAGTTATCAACAGTAACTTTTGTCAAAGTTCTTCTTGGCTTTTGC
ATCTCAGAAATCAGTCGTGTTCCGGGAACAAGCTGAAAGGAGCCTGAACATGACTTCGTT
GGAGGCTTTGAAATTCTTACAGACAGGTCATACCTGCAGAGAAAGCATGTCTGAAGGGCA
ATCTGGGGAGGATCTCCAAAGAAAATGTCTATCCATTACATCTCTACCTTTTCCCAAGCT
TGCTTGTTTCATCATCCCTATGGCAGTCTTAGCTGCAGCTGTGATTGCACTTTCCACTTT
TTTGGCAGTGAGAGGGGCAGATCGGCAAGAGTACATTCGGTATGTTACCTGCCCAAAAGG
ATGGATTGGATTTGGAAGTAAGTGTTTTTATTTTTCTGAAGACGCAAAGAACTGGACAGT
CAGCCAGATGTTCTGTGTCTCATTAGAAGCTCATCTGGCTCAGTTTGAAACCGAAGAGGA
GCTGAAGTTCCTGAAAAGATACAAAGGCCCGTCTGACCATTGGATTGGCCTTAGCAGAGA
GTCACCACATCACGTTTGGAGGTGGACGGACAACACTGAATATAATGCCTCGTTTGTCAT
CAGAGGAGTTGGAGAATGTGCCTACCTGAATGACATTGGAGTTAGTAGTGCCAGGACCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCATTCATGTTTTCTGGTATTGAAAAATTCTGGAAGTTCCACAAAACAATCCTTAATAA
TAAGGATTCATACTAAAGTTATCAACAGTAACTTTTGTCAAAGTTCTTCTTGGCTTTTGC
ATCTCAGAAATCAGTCGTGTTCCGGGAACAAGCTGAAAGGAGCCTGAACATGACTTCGTT
GGAGGCTTTGAAATTCTTACAGACAGGTCATACCTGCAGAGAAAGCATGTCTGAAGGGCA
ATCTGGGGAGGATCTCCAAAGAAAATGTCTATCCATTACATCTCTACCTTTTCCCAAGCT
TGCTTGTTTCATCATCCCTATGGCAGTCTTAGCTGCAGCTGTGATTGCACTTTCCACTTT
TTTGGCAGTGAGAGGGGCAGATCGGCAAGAGTACATTCGGTATGTTACCTGCCCAAAAGG
ATGGATTGGATTTGGAAGTAAGTGTTTTTATTTTTCTGAAGACGCAAAGAACTGGACAGT
CAGCCAGATGTTCTGTGTCTCATTAGAAGCTCATCTGGCTCAGTTTGAAACCGAAGAGGA
GCTGAAGTTCCTGAAAAGATACAAAGGCCCGTCTGACCATTGGATTGGCCTTAGCAGAGA
GTCACCACATCACGTTTGGAGGTGGACGGACAACACTGAATATAATGCCTCGTTTGTCAT
CAGAGGAGTTGGAGAATGTGCCTACCTGAATGACATTGGAGTTAGTAGTGCCAGGACCTA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q5RF47_PONPY

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5RF47_PONPY

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               394-544, gnl|bosTau2|chr5 (59051453-59051603)
               

               
               394-544, gnl|Hg17|chr12 (9699015-9699166)
               

               
               394-544, gnl|Mm7|chr6 (128917933-128918086)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               394-544, gnl|bosTau2|chr5 (59051453-59051603)
               

               
               394-544, gnl|Hg17|chr12 (9699015-9699166)
               

               
               394-544, gnl|Mm7|chr6 (128917933-128918086)

Expressed library(ies): 6 entry(ies)

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Expressed library(ies): 6 entry(ies)

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               cbl (0.573987)
               

               
               nco (0.323468)
               

               
               rec (0.17307)
               

               
               cly (0.120642)
               

               
               cty (0.10408)
               

               
               jej (0.0989218)

Expressed library(ies): 6 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.573987)
               

               
               nco (0.323468)
               

               
               rec (0.17307)
               

               
               cly (0.120642)
               

               
               cty (0.10408)
               

               
               jej (0.0989218)

	394-544, gnl\|bosTau2\|chr5 (59051453-59051603)
	394-544, gnl\|Hg17\|chr12 (9699015-9699166)
	394-544, gnl\|Mm7\|chr6 (128917933-128918086)

	cbl (0.573987)
	nco (0.323468)
	rec (0.17307)
	cly (0.120642)
	cty (0.10408)
	jej (0.0989218)