Ss1.1-rcbl0_023642.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTATCTTACAGAAAAAAAACTCTGAACACTGTAGGAGAAAATAATTTCAAGTGCATGGTG GATCAGAAGTGTGTCAGTGTCAAAATAAATAAGATAAAGTAGTTCTAAAGCAATCTTCGT CAGTGTATCCCCACCACACTCAGGGAAGTCATTGATGCCTACAGTCAGAGAATCTACTGA AACTGAAAGACAAAGTCTTCGGATGTTTCTTCCAACAATATCAAAACCAAGAGGTCTTCA CAGTGGATTATTTTTAAAAAGACCTAGAGCTTTGCATTTCAACAAGGCAGGGATGGATCT GATGACAGCGAAGTCCTGGAGTGAAAAGAAGTAAGAGACAATGGACCCTACAGAGCCTCG AAGAAATATGCCTATGCCTGGTGAACCTGGTAGTCCAGAAGAAAGGCATTTGTGGCGATT ATCTAGTGGAATGACATTAAACTCCATCAGTGGCAAGGGATATTGACGATAAATCCAGAG ATGGCCATGAACCCTTTGTTGACCACATCAGGGCAGCAGAGGATCCCACTGATTCCCTCA TCATTTGAACTTCCAAGTGCGGATAGAGATTTACTGCCTCCCACTGTGGCTCCAACTGAT CCAAGACAGTTTTGTGTTCCTTCTCAGTTTGGAACC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTATCTTACAGAAAAAAAACTCTGAACACTGTAGGAGAAAATAATTTCAAGTGCATGGTG GATCAGAAGTGTGTCAGTGTCAAAATAAATAAGATAAAGTAGTTCTAAAGCAATCTTCGT CAGTGTATCCCCACCACACTCAGGGAAGTCATTGATGCCTACAGTCAGAGAATCTACTGA AACTGAAAGACAAAGTCTTCGGATGTTTCTTCCAACAATATCAAAACCAAGAGGTCTTCA CAGTGGATTATTTTTAAAAAGACCTAGAGCTTTGCATTTCAACAAGGCAGGGATGGATCT GATGACAGCGAAGTCCTGGAGTGAAAAGAAGTAAGAGACAATGGACCCTACAGAGCCTCG AAGAAATATGCCTATGCCTGGTGAACCTGGTAGTCCAGAAGAAAGGCATTTGTGGCGATT ATCTAGTGGAATGACATTAAACTCCATCAGTGGCAAGGGATATTGACGATAAATCCAGAG ATGGCCATGAACCCTTTGTTGACCACATCAGGGCAGCAGAGGATCCCACTGATTCCCTCA TCATTTGAACTTCCAAGTGCGGATAGAGATTTACTGCCTCCCACTGTGGCTCCAACTGAT CCAAGACAGTTTTGTGTTCCTTCTCAGTTTGGAACC |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 12-156, gnl|bosTau2|chr1 (63118756-63118605) | |
| 12-156, gnl|canFam2|chr34 (37513176-37513534) | |
| 12-156, gnl|dasNov1|scaffold_18624 (9393-9073) | |
| 12-156, gnl|hg17|chr3 (171107843-171108199) | |
| 12-156, gnl|Hg17|chr3 (171107887-171108038) | |
| 12-156, gnl|loxAfr1|scaffold_6438 (98576-98219) | |
| 12-156, gnl|mm7|chr3 (30552772-30553115) | |
| 12-156, gnl|Mm7|chr3 (30552814-30552947) | |
| 12-156, gnl|oryCun1|scaffold_189281 (7509-7191) | |
| 12-156, gnl|panTro1|chr2 (174596898-174597252) | |
| 12-156, gnl|rheMac2|chr2 (117107566-117107196) | |
| 12-156, gnl|rn3|chr2 (117013200-117012867) | |
| 336-438, gnl|bosTau2|chr1 (63107659-63107557) | |
| 336-438, gnl|canFam2|chr34 (37522384-37522528) | |
| 336-438, gnl|dasNov1|scaffold_18624 (2484-2336) | |
| 336-438, gnl|echTel1|scaffold_309038 (52358-52232) | |
| 336-438, gnl|galGal2|chr9 (19382688-19382560) | |
| 336-438, gnl|hg17|chr3 (171115263-171115407) | |
| 336-438, gnl|Hg17|chr3 (171115285-171115387) | |
| 336-438, gnl|loxAfr1|scaffold_6438 (88637-88496) | |
| 336-438, gnl|monDom2|scaffold_52 (2094988-2094839) | |
| 336-438, gnl|oryCun1|scaffold_86360 (2204-2342) | |
| 336-438, gnl|panTro1|chr2 (174604386-174604532) | |
| 336-438, gnl|rheMac2|chr2 (117100167-117100022) | |
| 440-571, gnl|bosTau2|chr1 (63104896-63104765) | |
| 440-571, gnl|canFam2|chr34 (37524321-37524575) | |
| 440-571, gnl|dasNov1|scaffold_10046 (2831-3085) | |
| 440-571, gnl|echTel1|scaffold_309038 (49977-49728) | |
| 440-571, gnl|galGal2|chr9 (19382008-19381724) | |
| 440-571, gnl|hg17|chr3 (171119914-171120168) | |
| 440-571, gnl|Hg17|chr3 (171119948-171120079) | |
| 440-571, gnl|mm7|chr3 (30562977-30563225) | |
| 440-571, gnl|Mm7|chr3 (30563011-30563138) | |
| 440-571, gnl|monDom2|scaffold_52 (2093762-2093535) | |
| 440-571, gnl|oryCun1|scaffold_86360 (4905-5155) | |
| 440-571, gnl|panTro1|chr2 (174609065-174609319) | |
| 440-571, gnl|rheMac2|chr2 (117095542-117095288) | |
| 440-571, gnl|rn3|chr2 (117002576-117002364) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 12-156, gnl|bosTau2|chr1 (63118756-63118605) | |
| 12-156, gnl|canFam2|chr34 (37513176-37513534) | |
| 12-156, gnl|dasNov1|scaffold_18624 (9393-9073) | |
| 12-156, gnl|hg17|chr3 (171107843-171108199) | |
| 12-156, gnl|Hg17|chr3 (171107887-171108038) | |
| 12-156, gnl|loxAfr1|scaffold_6438 (98576-98219) | |
| 12-156, gnl|mm7|chr3 (30552772-30553115) | |
| 12-156, gnl|Mm7|chr3 (30552814-30552947) | |
| 12-156, gnl|oryCun1|scaffold_189281 (7509-7191) | |
| 12-156, gnl|panTro1|chr2 (174596898-174597252) | |
| 12-156, gnl|rheMac2|chr2 (117107566-117107196) | |
| 12-156, gnl|rn3|chr2 (117013200-117012867) | |
| 336-438, gnl|bosTau2|chr1 (63107659-63107557) | |
| 336-438, gnl|canFam2|chr34 (37522384-37522528) | |
| 336-438, gnl|dasNov1|scaffold_18624 (2484-2336) | |
| 336-438, gnl|echTel1|scaffold_309038 (52358-52232) | |
| 336-438, gnl|galGal2|chr9 (19382688-19382560) | |
| 336-438, gnl|hg17|chr3 (171115263-171115407) | |
| 336-438, gnl|Hg17|chr3 (171115285-171115387) | |
| 336-438, gnl|loxAfr1|scaffold_6438 (88637-88496) | |
| 336-438, gnl|monDom2|scaffold_52 (2094988-2094839) | |
| 336-438, gnl|oryCun1|scaffold_86360 (2204-2342) | |
| 336-438, gnl|panTro1|chr2 (174604386-174604532) | |
| 336-438, gnl|rheMac2|chr2 (117100167-117100022) | |
| 440-571, gnl|bosTau2|chr1 (63104896-63104765) | |
| 440-571, gnl|canFam2|chr34 (37524321-37524575) | |
| 440-571, gnl|dasNov1|scaffold_10046 (2831-3085) | |
| 440-571, gnl|echTel1|scaffold_309038 (49977-49728) | |
| 440-571, gnl|galGal2|chr9 (19382008-19381724) | |
| 440-571, gnl|hg17|chr3 (171119914-171120168) | |
| 440-571, gnl|Hg17|chr3 (171119948-171120079) | |
| 440-571, gnl|mm7|chr3 (30562977-30563225) | |
| 440-571, gnl|Mm7|chr3 (30563011-30563138) | |
| 440-571, gnl|monDom2|scaffold_52 (2093762-2093535) | |
| 440-571, gnl|oryCun1|scaffold_86360 (4905-5155) | |
| 440-571, gnl|panTro1|chr2 (174609065-174609319) | |
| 440-571, gnl|rheMac2|chr2 (117095542-117095288) | |
| 440-571, gnl|rn3|chr2 (117002576-117002364) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbl (0.229595) |