Non-Coding RNA Search

Ss1.1-rcbl0_023890.5

Sequence:


               
               TTTCACAACTCATTAGATGCCCTTTGTAGTTGTCAAAACTTTTCTGGAGCTCTTTACACA
TCATTGAAGCGAACCCCCTACTGTCTTCTGCCTGCAGCAATTACAGTTCGTCTTTCAAGT
TTTCCTTTGGCGTCTGTGGTACTGCTGTCTTCAAAGCAGATTTATTAGTGCTGTCTTCTG
TACTGCAGATTTCTTCATTCTTTACCTTTTTCTTTTTCATCGGAACTTGTGTGCTTCATT
CTTATGTACCTACTTTTGCACCTTATAATCATCCTTTATGCCTCCAAGTACTATTCTCTT
TTTCTATTTCTATGTAAGAAGTATTTCTTGACCAAATATATACTAACACTATGCTAGATG
CTGTAGTCAATTCAGAAGTAACGCCTAATACCATTTCTTTCTCCTAGAATTTGTTTTTTT
TTTTCTCCTAGAACTTTAGATTCCAGATAGAGAAATAACACACGTTCAAGTTAAAGATTA
AAGAAGCAGCTCACTTTTGTATCTGATTAAGGTAAAGGATGCGTAGTGCACACTATAAAT
GCCTGGGAAGTTCAGTTGAGAGGTTCTTTAGAATGGCTTACCTAAGGCTCCACTGAAATG
GAAATCTTGGAAGACTGGGAAAATTTGGATGGACAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCACAACTCATTAGATGCCCTTTGTAGTTGTCAAAACTTTTCTGGAGCTCTTTACACA
TCATTGAAGCGAACCCCCTACTGTCTTCTGCCTGCAGCAATTACAGTTCGTCTTTCAAGT
TTTCCTTTGGCGTCTGTGGTACTGCTGTCTTCAAAGCAGATTTATTAGTGCTGTCTTCTG
TACTGCAGATTTCTTCATTCTTTACCTTTTTCTTTTTCATCGGAACTTGTGTGCTTCATT
CTTATGTACCTACTTTTGCACCTTATAATCATCCTTTATGCCTCCAAGTACTATTCTCTT
TTTCTATTTCTATGTAAGAAGTATTTCTTGACCAAATATATACTAACACTATGCTAGATG
CTGTAGTCAATTCAGAAGTAACGCCTAATACCATTTCTTTCTCCTAGAATTTGTTTTTTT
TTTTCTCCTAGAACTTTAGATTCCAGATAGAGAAATAACACACGTTCAAGTTAAAGATTA
AAGAAGCAGCTCACTTTTGTATCTGATTAAGGTAAAGGATGCGTAGTGCACACTATAAAT
GCCTGGGAAGTTCAGTTGAGAGGTTCTTTAGAATGGCTTACCTAAGGCTCCACTGAAATG
GAAATCTTGGAAGACTGGGAAAATTTGGATGGACAG

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               1-412, gnl|bosTau2|chr1 (6525601-6525183)
               

               
               1-412, gnl|Hg17|chr21 (29319675-29320091)
               


               
               418-633, gnl|bosTau2|chr1 (6525201-6524982)
               

               
               418-633, gnl|Hg17|chr21 (29320073-29320290)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-412, gnl|bosTau2|chr1 (6525601-6525183)
               

               
               1-412, gnl|Hg17|chr21 (29319675-29320091)
               


               
               418-633, gnl|bosTau2|chr1 (6525201-6524982)
               

               
               418-633, gnl|Hg17|chr21 (29320073-29320290)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (1.60716)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (1.60716)

	1-412, gnl\|bosTau2\|chr1 (6525601-6525183)
	1-412, gnl\|Hg17\|chr21 (29319675-29320091)

	418-633, gnl\|bosTau2\|chr1 (6525201-6524982)
	418-633, gnl\|Hg17\|chr21 (29320073-29320290)