Ss1.1-rcbl0_024294.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTGCGGAGAGCGGGAAAAGTGCTGGAATCCTTACCCTTCCCATCATGAGCAGAAATTCT AGAAAAACAATAGGCAAAGTGAGAGTTGACTATATAATTATTAAGCCATTACCAGGATAT GGTTGTGACATGAAATCCTCATTTTCCAAGTATTGGAAGCCAAGAACACCATTGGATGTT GGACATCGAGGTGCAGGGAATTCTACAACAACTGCTCAGCTTGCTAAAGTTCAGGAAAAT ACTATTGCTTCTTTAAGAAATGCTGCTAGTCACGGTGCAGCCTTTGTAGAATTTGATGTT CATCTGTCAAAAGATTTTGTGCCTGTGGTATATCATGATCTCACCTGTTGTTTGACTATG AAAAAGAAATTTGATGCTGATCCAGTTGAATTATTTGAAATTCCAGTAAAGGAATTAACA TTTGACCAACTACAGTTGTTGAAGCTCACTCATGTGACTGCACTGAAATCTAAGGATCTG AAAGAATCTGTGGTTGAGGAAGAAAATTCTCTTTCTGAAAATCAGCCATTTCCTTCTCTT AAGATGGTTTTAGAGTCTCTGCCAGAAGATGTAGGGTTTAACATAGAAATAAAATGGATC TGCCAACAAAGGGATGGAATGTGGGATGGTAACTTATCAACATATTTTGACATGAATATG TTTTTGGATATAATTTTAAAAACTGTCTTGGAAAATTCTGGAAAAAGGAGGATAGTGTTT TCTTCATTTGATGCAGATATTTGCACAATGGTTCGGCAAAAGCAGAACAAATATCCGATA TTATTTTTGACTCAAGGGAAATCTGATATTTACCCTGAACTCATGGACCTTAGATCTCGG ACAACCCCCATTGCAATGAGCTTTGCACAGTTTGAAAATCTATTGGGGATTAATGCACAT ACTGAAGACTTACTCAGAAACCCATCCTATATTCAGGAGGCAAAAGCTAAGGGACTGGTC ATATTCTGCTGGGGTGATGATACCAACGATCCTGAAAACAGAAAGAAATTAAAGGAACTG GGAGTTAATGGTCTAATTTATGAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTGCGGAGAGCGGGAAAAGTGCTGGAATCCTTACCCTTCCCATCATGAGCAGAAATTCT AGAAAAACAATAGGCAAAGTGAGAGTTGACTATATAATTATTAAGCCATTACCAGGATAT GGTTGTGACATGAAATCCTCATTTTCCAAGTATTGGAAGCCAAGAACACCATTGGATGTT GGACATCGAGGTGCAGGGAATTCTACAACAACTGCTCAGCTTGCTAAAGTTCAGGAAAAT ACTATTGCTTCTTTAAGAAATGCTGCTAGTCACGGTGCAGCCTTTGTAGAATTTGATGTT CATCTGTCAAAAGATTTTGTGCCTGTGGTATATCATGATCTCACCTGTTGTTTGACTATG AAAAAGAAATTTGATGCTGATCCAGTTGAATTATTTGAAATTCCAGTAAAGGAATTAACA TTTGACCAACTACAGTTGTTGAAGCTCACTCATGTGACTGCACTGAAATCTAAGGATCTG AAAGAATCTGTGGTTGAGGAAGAAAATTCTCTTTCTGAAAATCAGCCATTTCCTTCTCTT AAGATGGTTTTAGAGTCTCTGCCAGAAGATGTAGGGTTTAACATAGAAATAAAATGGATC TGCCAACAAAGGGATGGAATGTGGGATGGTAACTTATCAACATATTTTGACATGAATATG TTTTTGGATATAATTTTAAAAACTGTCTTGGAAAATTCTGGAAAAAGGAGGATAGTGTTT TCTTCATTTGATGCAGATATTTGCACAATGGTTCGGCAAAAGCAGAACAAATATCCGATA TTATTTTTGACTCAAGGGAAATCTGATATTTACCCTGAACTCATGGACCTTAGATCTCGG ACAACCCCCATTGCAATGAGCTTTGCACAGTTTGAAAATCTATTGGGGATTAATGCACAT ACTGAAGACTTACTCAGAAACCCATCCTATATTCAGGAGGCAAAAGCTAAGGGACTGGTC ATATTCTGCTGGGGTGATGATACCAACGATCCTGAAAACAGAAAGAAATTAAAGGAACTG GGAGTTAATGGTCTAATTTATGAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 52 entry(ies) | More info |
| Aligned organism(s): 52 entry(ies) | Help | Less info |
| 612-750, gnl|bosTau2|chr13 (30219018-30218880) | |
| 612-750, gnl|canFam2|chr24 (19189448-19189336) | |
| 612-750, gnl|canFam2|chr24 (19189453-19189310) | |
| 612-750, gnl|danRer3|chrNA (172454221-172454321) | |
| 612-750, gnl|danRer3|chrNA (172454204-172454347) | |
| 612-750, gnl|dasNov1|scaffold_21823 (15158-15022) | |
| 612-750, gnl|dasNov1|scaffold_32781 (9916-9806) | |
| 612-750, gnl|echTel1|scaffold_288815 (10782-10670) | |
| 612-750, gnl|echTel1|scaffold_288815 (10782-10644) | |
| 612-750, gnl|fr1|chrUn (169763932-169763855) | |
| 612-750, gnl|fr1|chrUn (169763819-169763676) | |
| 612-750, gnl|galGal2|chr3 (13073217-13073328) | |
| 612-750, gnl|galGal2|chr3 (13073211-13073354) | |
| 612-750, gnl|hg17|chr20 (5488581-5488724) | |
| 612-750, gnl|Hg17|chr20 (5488723-5488585) | |
| 612-750, gnl|hg17|chr7 (57027135-57027246) | |
| 612-750, gnl|loxAfr1|scaffold_10979 (45354-45242) | |
| 612-750, gnl|loxAfr1|scaffold_10979 (45359-45216) | |
| 612-750, gnl|mm7|chr2 (132276215-132276327) | |
| 612-750, gnl|mm7|chr2 (132276210-132276353) | |
| 612-750, gnl|Mm7|chr2 (132276352-132276214) | |
| 612-750, gnl|monDom2|scaffold_1 (35744372-35744484) | |
| 612-750, gnl|monDom2|scaffold_1 (35744367-35744510) | |
| 612-750, gnl|panTro1|chr21 (5472865-5473008) | |
| 612-750, gnl|panTro1|chr6 (58782410-58782521) | |
| 612-750, gnl|rheMac2|chr10 (38852942-38853054) | |
| 612-750, gnl|rheMac2|chr10 (38852937-38853080) | |
| 612-750, gnl|rn3|chr3 (120212862-120212974) | |
| 612-750, gnl|rn3|chr3 (120212857-120213000) | |
| 612-750, gnl|tetNig1|chr14 (7494346-7494246) | |
| 612-750, gnl|tetNig1|chr14 (7494362-7494220) | |
| 612-750, gnl|xenTro1|scaffold_234 (190005-189893) | |
| 612-750, gnl|xenTro1|scaffold_234 (190010-189867) | |
| 878-1044, gnl|bosTau2|chr13 (30217925-30217758) | |
| 878-1044, gnl|canFam2|chr24 (19190864-19190703) | |
| 878-1044, gnl|danRer3|chrNA (172452083-172452244) | |
| 878-1044, gnl|dasNov1|scaffold_21823 (15455-15294) | |
| 878-1044, gnl|echTel1|scaffold_180008 (3336-3498) | |
| 878-1044, gnl|fr1|chrUn (169764490-169764329) | |
| 878-1044, gnl|galGal2|chr3 (13071808-13071969) | |
| 878-1044, gnl|hg17|chr20 (5486591-5486752) | |
| 878-1044, gnl|Hg17|chr20 (5486760-5486593) | |
| 878-1044, gnl|loxAfr1|scaffold_10979 (46766-46605) | |
| 878-1044, gnl|mm7|chr2 (132274927-132275088) | |
| 878-1044, gnl|Mm7|chr2 (132275096-132274929) | |
| 878-1044, gnl|monDom2|scaffold_1 (35737297-35737458) | |
| 878-1044, gnl|oryCun1|scaffold_157663 (1384-1223) | |
| 878-1044, gnl|panTro1|chr21 (5470871-5471032) | |
| 878-1044, gnl|rheMac2|chr10 (38851072-38851233) | |
| 878-1044, gnl|rn3|chr3 (120211643-120211804) | |
| 878-1044, gnl|tetNig1|chr14 (7494895-7494734) | |
| 878-1044, gnl|xenTro1|scaffold_234 (193593-193432) |
| Aligned organism(s): 52 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 612-750, gnl|bosTau2|chr13 (30219018-30218880) | |
| 612-750, gnl|canFam2|chr24 (19189448-19189336) | |
| 612-750, gnl|canFam2|chr24 (19189453-19189310) | |
| 612-750, gnl|danRer3|chrNA (172454221-172454321) | |
| 612-750, gnl|danRer3|chrNA (172454204-172454347) | |
| 612-750, gnl|dasNov1|scaffold_21823 (15158-15022) | |
| 612-750, gnl|dasNov1|scaffold_32781 (9916-9806) | |
| 612-750, gnl|echTel1|scaffold_288815 (10782-10670) | |
| 612-750, gnl|echTel1|scaffold_288815 (10782-10644) | |
| 612-750, gnl|fr1|chrUn (169763932-169763855) | |
| 612-750, gnl|fr1|chrUn (169763819-169763676) | |
| 612-750, gnl|galGal2|chr3 (13073217-13073328) | |
| 612-750, gnl|galGal2|chr3 (13073211-13073354) | |
| 612-750, gnl|hg17|chr20 (5488581-5488724) | |
| 612-750, gnl|Hg17|chr20 (5488723-5488585) | |
| 612-750, gnl|hg17|chr7 (57027135-57027246) | |
| 612-750, gnl|loxAfr1|scaffold_10979 (45354-45242) | |
| 612-750, gnl|loxAfr1|scaffold_10979 (45359-45216) | |
| 612-750, gnl|mm7|chr2 (132276215-132276327) | |
| 612-750, gnl|mm7|chr2 (132276210-132276353) | |
| 612-750, gnl|Mm7|chr2 (132276352-132276214) | |
| 612-750, gnl|monDom2|scaffold_1 (35744372-35744484) | |
| 612-750, gnl|monDom2|scaffold_1 (35744367-35744510) | |
| 612-750, gnl|panTro1|chr21 (5472865-5473008) | |
| 612-750, gnl|panTro1|chr6 (58782410-58782521) | |
| 612-750, gnl|rheMac2|chr10 (38852942-38853054) | |
| 612-750, gnl|rheMac2|chr10 (38852937-38853080) | |
| 612-750, gnl|rn3|chr3 (120212862-120212974) | |
| 612-750, gnl|rn3|chr3 (120212857-120213000) | |
| 612-750, gnl|tetNig1|chr14 (7494346-7494246) | |
| 612-750, gnl|tetNig1|chr14 (7494362-7494220) | |
| 612-750, gnl|xenTro1|scaffold_234 (190005-189893) | |
| 612-750, gnl|xenTro1|scaffold_234 (190010-189867) | |
| 878-1044, gnl|bosTau2|chr13 (30217925-30217758) | |
| 878-1044, gnl|canFam2|chr24 (19190864-19190703) | |
| 878-1044, gnl|danRer3|chrNA (172452083-172452244) | |
| 878-1044, gnl|dasNov1|scaffold_21823 (15455-15294) | |
| 878-1044, gnl|echTel1|scaffold_180008 (3336-3498) | |
| 878-1044, gnl|fr1|chrUn (169764490-169764329) | |
| 878-1044, gnl|galGal2|chr3 (13071808-13071969) | |
| 878-1044, gnl|hg17|chr20 (5486591-5486752) | |
| 878-1044, gnl|Hg17|chr20 (5486760-5486593) | |
| 878-1044, gnl|loxAfr1|scaffold_10979 (46766-46605) | |
| 878-1044, gnl|mm7|chr2 (132274927-132275088) | |
| 878-1044, gnl|Mm7|chr2 (132275096-132274929) | |
| 878-1044, gnl|monDom2|scaffold_1 (35737297-35737458) | |
| 878-1044, gnl|oryCun1|scaffold_157663 (1384-1223) | |
| 878-1044, gnl|panTro1|chr21 (5470871-5471032) | |
| 878-1044, gnl|rheMac2|chr10 (38851072-38851233) | |
| 878-1044, gnl|rn3|chr3 (120211643-120211804) | |
| 878-1044, gnl|tetNig1|chr14 (7494895-7494734) | |
| 878-1044, gnl|xenTro1|scaffold_234 (193593-193432) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbl (0.45919) | |
| elu (0.385356) |