Non-Coding RNA Search

Ss1.1-rcbl_0231.5

Sequence:


               
               AACACAATCAATTGGATACTGTTGAAGAAAAACTCTTTTTGTAAATAGCCCTTTTGGTGC
TGCTGTGTATAGTCTTCATTCTAAATTGGGTGGTATTTCTGGCTAGAGTTTTTAAGGGAA
CAAAAAGAAAACCAGCCTACCATCTTCTTTAAAGGACCCACTTTTAGAGTTTGTTTCAAC
CTTTTCCTAATTCTCTAAGGTTATTGGCAGCACTCTGCCCTACACCAACAGTGTTGAAAT
GTTAATAATACCTTGGTTATGGCAGAATGTTATTAAGGACCATCCTGTCAGAGTTCCAGT
TATGCCATTTTATTCTGTTCTCAAATAAAGCACAGTGTCACTAGTTTTTCCAAATTATAT
CTCATATTGGCCTAATTATAAAATCATAAACATTTTGAGAAATTTAGGTGATAGTGAAAT
AGGAAAAAGAGGTCCAGGGAATATTGACATTACAGACTAATTCTCGTAGGAGTTCCCTGG
TGGCTCAGCAGATTACAGATCTGGTGTTCTCACTGCCTTGACTTGGGTCGCTGCTATGGT
GTGGATTCAGCTCCTGGCCTGGGAACCTCTGCGTGTTGAAGCTGTAGCCAAAGTCAAAAC
AAAACAAACAAATGCTTGTAGTGGCTTGTTCACTATGTAAATATATATGTGTATATATAT
ATATATATATACACACATATATAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACACAATCAATTGGATACTGTTGAAGAAAAACTCTTTTTGTAAATAGCCCTTTTGGTGC
TGCTGTGTATAGTCTTCATTCTAAATTGGGTGGTATTTCTGGCTAGAGTTTTTAAGGGAA
CAAAAAGAAAACCAGCCTACCATCTTCTTTAAAGGACCCACTTTTAGAGTTTGTTTCAAC
CTTTTCCTAATTCTCTAAGGTTATTGGCAGCACTCTGCCCTACACCAACAGTGTTGAAAT
GTTAATAATACCTTGGTTATGGCAGAATGTTATTAAGGACCATCCTGTCAGAGTTCCAGT
TATGCCATTTTATTCTGTTCTCAAATAAAGCACAGTGTCACTAGTTTTTCCAAATTATAT
CTCATATTGGCCTAATTATAAAATCATAAACATTTTGAGAAATTTAGGTGATAGTGAAAT
AGGAAAAAGAGGTCCAGGGAATATTGACATTACAGACTAATTCTCGTAGGAGTTCCCTGG
TGGCTCAGCAGATTACAGATCTGGTGTTCTCACTGCCTTGACTTGGGTCGCTGCTATGGT
GTGGATTCAGCTCCTGGCCTGGGAACCTCTGCGTGTTGAAGCTGTAGCCAAAGTCAAAAC
AAAACAAACAAATGCTTGTAGTGGCTTGTTCACTATGTAAATATATATGTGTATATATAT
ATATATATATACACACATATATAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-438, gnl|bosTau2|chr11 (49451188-49450767)
               

               
               5-438, gnl|Hg17|chr2 (70289003-70288575)
               

               
               5-438, gnl|Mm7|chr6 (86545162-86545524)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-438, gnl|bosTau2|chr11 (49451188-49450767)
               

               
               5-438, gnl|Hg17|chr2 (70289003-70288575)
               

               
               5-438, gnl|Mm7|chr6 (86545162-86545524)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               mas (0.210305)
               

               
               cbl (0.114797)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mas (0.210305)
               

               
               cbl (0.114797)

	5-438, gnl\|bosTau2\|chr11 (49451188-49450767)
	5-438, gnl\|Hg17\|chr2 (70289003-70288575)
	5-438, gnl\|Mm7\|chr6 (86545162-86545524)