Non-Coding RNA Search

Ss1.1-rcbl_0242.5

Sequence:


               
               CTGTACACCTTCGGCCACCGGGCCAATGAGTGGGAAAAGACTGATGTGGAAGGAACCTTA
TTTGTTTACACAAGGTCTGCCTCTCCCAAGCACGGCTTCACCATCATGAACAGACTGAGC
ATGGAGAACAGAACGGAGCCCATCACGAAAGACCTGGACTTCCTGCTCCAGGACCCCTTC
CTCCTCTACAGGAACGCCAGATCAGCCAGGAGTCTGGTGTTTGAGACTGTGTGACTCTCC
TTGCTGTTAGTGTCAGGAATGCTGGGGGGTCAGCCCTGGGAACTGGGAAACGCATGCCTC
AGTGGGGGACTCTAAGTGGAGATGGTGTGGTGTGTTGATGTGTGTTTGGACCTCGTCCTC
CAGCAGCCAGGAGTCTGTGGTGTGACCTGGGCGAGGCCGGGGAGCAGTCCTCAGCCAGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGTACACCTTCGGCCACCGGGCCAATGAGTGGGAAAAGACTGATGTGGAAGGAACCTTA
TTTGTTTACACAAGGTCTGCCTCTCCCAAGCACGGCTTCACCATCATGAACAGACTGAGC
ATGGAGAACAGAACGGAGCCCATCACGAAAGACCTGGACTTCCTGCTCCAGGACCCCTTC
CTCCTCTACAGGAACGCCAGATCAGCCAGGAGTCTGGTGTTTGAGACTGTGTGACTCTCC
TTGCTGTTAGTGTCAGGAATGCTGGGGGGTCAGCCCTGGGAACTGGGAAACGCATGCCTC
AGTGGGGGACTCTAAGTGGAGATGGTGTGGTGTGTTGATGTGTGTTTGGACCTCGTCCTC
CAGCAGCCAGGAGTCTGTGGTGTGACCTGGGCGAGGCCGGGGAGCAGTCCTCAGCCAGGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55637587|ref|XP_508924.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55637587|ref|XP_508924.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               73-416, gnl|bosTau2|chr5 (65730903-65730542)
               

               
               73-416, gnl|Hg17|chr12 (1972820-1972379)
               

               
               73-416, gnl|Mm7|chr6 (119208790-119209158)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               73-416, gnl|bosTau2|chr5 (65730903-65730542)
               

               
               73-416, gnl|Hg17|chr12 (1972820-1972379)
               

               
               73-416, gnl|Mm7|chr6 (119208790-119209158)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pgl (0.118483)
               

               
               cbl (0.114797)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)
               

               
               cbl (0.114797)

	73-416, gnl\|bosTau2\|chr5 (65730903-65730542)
	73-416, gnl\|Hg17\|chr12 (1972820-1972379)
	73-416, gnl\|Mm7\|chr6 (119208790-119209158)