Ss1.1-rcbl_0291.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAAGAAGTGGACCCCCGGATACAGGGAGAACTGGAGAAGTTAAATCAATCCACGGATGAT ATCAACAGACGGGAGACTGAACTTGAGGACATTCGTCAGAAGTTCCGCTCTGTTCTGGTT GAAGCGACAGTGAAACTGGATGAACTGGTGAAGAAAATTGGCAAAGCCGTGGAAGATGCG AAGCCCTACTGGGAGGCACGGAGGGTGGCGAGGCAGGCACAGCTGGAAGCCCAGAGAGCC ACCCAGGACTTCCAAAGGGCCACGGAGGTGCTCCGTGCCGCCAAGGAGACCATCTCCCTG GCCGAGCAGCGGCTGCTGGAGGATGACAAGCGACAGTTCGACTCAGCCTGGCAGGAGATG CTGAACCACGCCACCCAGAGGGTCATGGAGGCGGAGCAGACCAAGACGAGGAGTGAGCTG GTGCACAAGGAGACAGCGGCCAGGTACAACGCAGCCATGGGCCGCATGCGGCAGCTGGAG AAGAAACTCAAGAGAGCCATCAGCAAGTCCAAGCCTTATTTTGAACTCAAATCGAAGTAC TACCTGCAACTTGAGCAGCTGAAGAAGACAGTGGATGAGCTGCAGGCCAAGCTGGCCCTG GCGAAGGGCGAGTACAAGACGGCCCTGAGGAACCTGGAGACCATCTCGGATGAGATCCAT GAGCGGCGGCGCTCCAGTGCCATGGGGCCCCGCGGCCGTGGCGTCGGCGCTGAGGGGGGC AGCACAGCCACTGAGGACCTGTCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAAGAAGTGGACCCCCGGATACAGGGAGAACTGGAGAAGTTAAATCAATCCACGGATGAT ATCAACAGACGGGAGACTGAACTTGAGGACATTCGTCAGAAGTTCCGCTCTGTTCTGGTT GAAGCGACAGTGAAACTGGATGAACTGGTGAAGAAAATTGGCAAAGCCGTGGAAGATGCG AAGCCCTACTGGGAGGCACGGAGGGTGGCGAGGCAGGCACAGCTGGAAGCCCAGAGAGCC ACCCAGGACTTCCAAAGGGCCACGGAGGTGCTCCGTGCCGCCAAGGAGACCATCTCCCTG GCCGAGCAGCGGCTGCTGGAGGATGACAAGCGACAGTTCGACTCAGCCTGGCAGGAGATG CTGAACCACGCCACCCAGAGGGTCATGGAGGCGGAGCAGACCAAGACGAGGAGTGAGCTG GTGCACAAGGAGACAGCGGCCAGGTACAACGCAGCCATGGGCCGCATGCGGCAGCTGGAG AAGAAACTCAAGAGAGCCATCAGCAAGTCCAAGCCTTATTTTGAACTCAAATCGAAGTAC TACCTGCAACTTGAGCAGCTGAAGAAGACAGTGGATGAGCTGCAGGCCAAGCTGGCCCTG GCGAAGGGCGAGTACAAGACGGCCCTGAGGAACCTGGAGACCATCTCGGATGAGATCCAT GAGCGGCGGCGCTCCAGTGCCATGGGGCCCCGCGGCCGTGGCGTCGGCGCTGAGGGGGGC AGCACAGCCACTGAGGACCTGTCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 213-383, gnl|bosTau2|chr1 (98691201-98691031) | |
| 213-383, gnl|canFam2|chr23 (30372554-30372413) | |
| 213-383, gnl|danRer3|chrNA (14673176-14673036) | |
| 213-383, gnl|echTel1|scaffold_310404 (44802-44943) | |
| 213-383, gnl|fr1|chrUn (191267347-191267206) | |
| 213-383, gnl|galGal2|chr2 (40575544-40575403) | |
| 213-383, gnl|hg17|chr3 (15286223-15286364) | |
| 213-383, gnl|Hg17|chr3 (15286392-15286222) | |
| 213-383, gnl|loxAfr1|scaffold_46372 (7281-7140) | |
| 213-383, gnl|mm7|chr14 (28817365-28817506) | |
| 213-383, gnl|Mm7|chr14 (28817534-28817364) | |
| 213-383, gnl|monDom2|scaffold_7 (70935436-70935577) | |
| 213-383, gnl|oryCun1|scaffold_161159 (5983-5842) | |
| 213-383, gnl|panTro1|chr2 (15900272-15900413) | |
| 213-383, gnl|rn3|chr16 (6836705-6836846) | |
| 213-383, gnl|tetNig1|chrUn_random (41376202-41376343) | |
| 213-383, gnl|xenTro1|scaffold_1228 (42938-42797) | |
| 554-743, gnl|bosTau2|chr1 (98681681-98681492) | |
| 554-743, gnl|Hg17|chr3 (15275563-15275374) | |
| 554-743, gnl|Mm7|chr14 (28807259-28807070) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 213-383, gnl|bosTau2|chr1 (98691201-98691031) | |
| 213-383, gnl|canFam2|chr23 (30372554-30372413) | |
| 213-383, gnl|danRer3|chrNA (14673176-14673036) | |
| 213-383, gnl|echTel1|scaffold_310404 (44802-44943) | |
| 213-383, gnl|fr1|chrUn (191267347-191267206) | |
| 213-383, gnl|galGal2|chr2 (40575544-40575403) | |
| 213-383, gnl|hg17|chr3 (15286223-15286364) | |
| 213-383, gnl|Hg17|chr3 (15286392-15286222) | |
| 213-383, gnl|loxAfr1|scaffold_46372 (7281-7140) | |
| 213-383, gnl|mm7|chr14 (28817365-28817506) | |
| 213-383, gnl|Mm7|chr14 (28817534-28817364) | |
| 213-383, gnl|monDom2|scaffold_7 (70935436-70935577) | |
| 213-383, gnl|oryCun1|scaffold_161159 (5983-5842) | |
| 213-383, gnl|panTro1|chr2 (15900272-15900413) | |
| 213-383, gnl|rn3|chr16 (6836705-6836846) | |
| 213-383, gnl|tetNig1|chrUn_random (41376202-41376343) | |
| 213-383, gnl|xenTro1|scaffold_1228 (42938-42797) | |
| 554-743, gnl|bosTau2|chr1 (98681681-98681492) | |
| 554-743, gnl|Hg17|chr3 (15275563-15275374) | |
| 554-743, gnl|Mm7|chr14 (28807259-28807070) |
| Expressed library(ies): 8 entry(ies) | More info |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
| cbl (0.229595) | |
| ece (0.229305) | |
| eje (0.197668) | |
| pla (0.133672) | |
| ese (0.126502) | |
| ebs (0.118301) | |
| cty (0.10408) | |
| jej (0.0989218) |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbl (0.229595) | |
| ece (0.229305) | |
| eje (0.197668) | |
| pla (0.133672) | |
| ese (0.126502) | |
| ebs (0.118301) | |
| cty (0.10408) | |
| jej (0.0989218) |