Non-Coding RNA Search

Ss1.1-rcbl_0551.5

Sequence:


               
               CGGCCGCGGGAGCTCTGCAGAGCTCCCGCGGAAGTCAGCCAGAGGTGATTCCTGTTCCCC
TTCCTGACACTGTTCTTCTGCCTGGAGCTTCAGTTCAGCTGCCGATGTGGTTGCGTGGGC
CAGATGAAGAAGGTGTCCATGAAATTAACTTTTTGTTTTACTATGAAAGTGTTAAAAAGC
AGCCCAAAATACGTCACAGAATATTGAGACACACAGCAGTCATTTGTACCAGTCGATCTC
TGAATGTACGAGCCACCGTCTGCAGAAGTAATTCTCTTGAAGATGAGGAGGGCAGAGGAG
GCAATATGCTAGTCTTTGTGGATGTGGAAAATACCAATACTAGTGAAGCAGGTGTTAAGG
AATTCCACATAGTACAAGTATCAAGTAGTAGCAAACACTGGAAGTTACAGAAATCTGTAA
ATCTCTCTGAAAACAAAGATGCCAAACTTGCCAGTAGGGAGAAGGGAAAATTTTGTTTCA
AGGCAATACGATGTAAGGAGGAAGAAGTTGCCACACAGTCCCCAGAAAAGTACACCTTTG
CAGATATCATCTTTGGAAATGAACAGATAGTAAGTTCGGCAAGCCCATGTGCAGACTTCT
TTTATCGAAGTTTATCCTCTGAATTGAAGAAACCACAAGCTCAGTCTTCTCTGCATACAG
AAAAACAGTCAATAGAGGATGCTGTGAGATTAATTCAGAAGTGCAATGAAGTAGATTTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGCCGCGGGAGCTCTGCAGAGCTCCCGCGGAAGTCAGCCAGAGGTGATTCCTGTTCCCC
TTCCTGACACTGTTCTTCTGCCTGGAGCTTCAGTTCAGCTGCCGATGTGGTTGCGTGGGC
CAGATGAAGAAGGTGTCCATGAAATTAACTTTTTGTTTTACTATGAAAGTGTTAAAAAGC
AGCCCAAAATACGTCACAGAATATTGAGACACACAGCAGTCATTTGTACCAGTCGATCTC
TGAATGTACGAGCCACCGTCTGCAGAAGTAATTCTCTTGAAGATGAGGAGGGCAGAGGAG
GCAATATGCTAGTCTTTGTGGATGTGGAAAATACCAATACTAGTGAAGCAGGTGTTAAGG
AATTCCACATAGTACAAGTATCAAGTAGTAGCAAACACTGGAAGTTACAGAAATCTGTAA
ATCTCTCTGAAAACAAAGATGCCAAACTTGCCAGTAGGGAGAAGGGAAAATTTTGTTTCA
AGGCAATACGATGTAAGGAGGAAGAAGTTGCCACACAGTCCCCAGAAAAGTACACCTTTG
CAGATATCATCTTTGGAAATGAACAGATAGTAAGTTCGGCAAGCCCATGTGCAGACTTCT
TTTATCGAAGTTTATCCTCTGAATTGAAGAAACCACAAGCTCAGTCTTCTCTGCATACAG
AAAAACAGTCAATAGAGGATGCTGTGAGATTAATTCAGAAGTGCAATGAAGTAGATTTGA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               30-193, gnl|bosTau2|chr24 (19969991-19970154)
               

               
               30-193, gnl|Hg17|chr18 (27691664-27691501)
               

               
               30-193, gnl|Mm7|chr18 (21207628-21207465)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               30-193, gnl|bosTau2|chr24 (19969991-19970154)
               

               
               30-193, gnl|Hg17|chr18 (27691664-27691501)
               

               
               30-193, gnl|Mm7|chr18 (21207628-21207465)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               hyp (0.142837)
               

               
               cbl (0.114797)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)
               

               
               cbl (0.114797)

	30-193, gnl\|bosTau2\|chr24 (19969991-19970154)
	30-193, gnl\|Hg17\|chr18 (27691664-27691501)
	30-193, gnl\|Mm7\|chr18 (21207628-21207465)