Ss1.1-rcbl_0592.5
|
TGCTGTGGCTGTGGTGTAGGCTGGTGGCTACAGCTCCAATTAGACTCCTAGCCTGGGAAC
CTCCATATGCTGAGGGAGCGGCCCTAGAAAAGGCAGAGAAAAAAAAAAAAAAAGCAGAGA
GATAACCTATGCAGTATTTAAAAAAAGATGTCTACTGCTTTCATGTGGAATATTGCCTGG
AATTGGATGGTTTAAATATTACCATTCAAAACATAAAATGGGATTTGGGTGATAAATTTT
TGTATATAATGTATGAAGTTCCTCTGCCCCCAAATGTAAAGAACCCTTTTAAAACATGTT
GAAAAAGTATTTTTTGGTCTGAAAGGGTGAAGGACCTGTAATCTTTCAGGAATTAAATTA
GGCATAAGGCCCAAGCCTGTGTGGGAAGGTGTGTACAGCAGTCACAGTTCCTAATATAAC
TTCCTTACTTTGTGCCAGGGCTCTTATGGCATTTAGTAACGTGATTCTGATGAGACACTG
GAGGGTTCCCAACAGCATAGCACGTTGCCATCCTGATGGACTGGGTTGAGCTGCCAAAAA
TGACAATCAGGGATTCATTAAGAAATCTTGGTCATTAAATTGATTTACAGATCTTTTATC
TTGTAAGAGTTTGTCACACAACTTTAAAACCCCAGTATTTCCCCCTCATTTTTTCCCTTT
TGGTTTAGTAGTTATTAAGACATTGTTCATAATTAGCATAGTACATTTGATTGCAGGCAA
ATTTATGGCACATGTAGCCTACAAAATTCTGTGAATTTCAACACTTGTTGAAATAGCTCT
AGTTATATTTACATGTGTTGTAAATATGTAAATAAATTCTTCATTTAGGTTACCTTCCAA
AATATAAACTCCCAGATTTAGATACCAGTAAGTTTGAATTATTGATAAAATGTTGAAAGT
GTTAAATGTTTGATTTTATATAACAAGCTTATTAAATATATTTTTGTG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGCTGTGGCTGTGGTGTAGGCTGGTGGCTACAGCTCCAATTAGACTCCTAGCCTGGGAAC
CTCCATATGCTGAGGGAGCGGCCCTAGAAAAGGCAGAGAAAAAAAAAAAAAAAGCAGAGA
GATAACCTATGCAGTATTTAAAAAAAGATGTCTACTGCTTTCATGTGGAATATTGCCTGG
AATTGGATGGTTTAAATATTACCATTCAAAACATAAAATGGGATTTGGGTGATAAATTTT
TGTATATAATGTATGAAGTTCCTCTGCCCCCAAATGTAAAGAACCCTTTTAAAACATGTT
GAAAAAGTATTTTTTGGTCTGAAAGGGTGAAGGACCTGTAATCTTTCAGGAATTAAATTA
GGCATAAGGCCCAAGCCTGTGTGGGAAGGTGTGTACAGCAGTCACAGTTCCTAATATAAC
TTCCTTACTTTGTGCCAGGGCTCTTATGGCATTTAGTAACGTGATTCTGATGAGACACTG
GAGGGTTCCCAACAGCATAGCACGTTGCCATCCTGATGGACTGGGTTGAGCTGCCAAAAA
TGACAATCAGGGATTCATTAAGAAATCTTGGTCATTAAATTGATTTACAGATCTTTTATC
TTGTAAGAGTTTGTCACACAACTTTAAAACCCCAGTATTTCCCCCTCATTTTTTCCCTTT
TGGTTTAGTAGTTATTAAGACATTGTTCATAATTAGCATAGTACATTTGATTGCAGGCAA
ATTTATGGCACATGTAGCCTACAAAATTCTGTGAATTTCAACACTTGTTGAAATAGCTCT
AGTTATATTTACATGTGTTGTAAATATGTAAATAAATTCTTCATTTAGGTTACCTTCCAA
AATATAAACTCCCAGATTTAGATACCAGTAAGTTTGAATTATTGATAAAATGTTGAAAGT
GTTAAATGTTTGATTTTATATAACAAGCTTATTAAATATATTTTTGTG
|
|
104-948, gnl|bosTau2|chr10 (29051114-29050238) |
|
104-948, gnl|canFam2|chr8 (30040732-30041595) |
|
104-948, gnl|dasNov1|scaffold_82271 (6513-5639) |
|
104-948, gnl|echTel1|scaffold_316072 (10183-10992) |
|
104-948, gnl|hg17|chr14 (50169851-50170741) |
|
104-948, gnl|Hg17|chr14 (50171309-50170111) |
|
104-948, gnl|loxAfr1|scaffold_3115 (56096-55231) |
|
104-948, gnl|mm7|chr12 (67905763-67906558) |
|
104-948, gnl|Mm7|chr12 (67906803-67906008) |
|
104-948, gnl|monDom2|scaffold_73 (6720243-6721021) |
|
104-948, gnl|oryCun1|scaffold_198782 (18068-18801) |
|
104-948, gnl|panTro1|chr15 (49584776-49585667) |
|
104-948, gnl|rheMac2|chr7 (113692706-113693596) |
|
104-948, gnl|rn3|chr6 (92084431-92085246) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
104-948, gnl|bosTau2|chr10 (29051114-29050238) |
|
104-948, gnl|canFam2|chr8 (30040732-30041595) |
|
104-948, gnl|dasNov1|scaffold_82271 (6513-5639) |
|
104-948, gnl|echTel1|scaffold_316072 (10183-10992) |
|
104-948, gnl|hg17|chr14 (50169851-50170741) |
|
104-948, gnl|Hg17|chr14 (50171309-50170111) |
|
104-948, gnl|loxAfr1|scaffold_3115 (56096-55231) |
|
104-948, gnl|mm7|chr12 (67905763-67906558) |
|
104-948, gnl|Mm7|chr12 (67906803-67906008) |
|
104-948, gnl|monDom2|scaffold_73 (6720243-6721021) |
|
104-948, gnl|oryCun1|scaffold_198782 (18068-18801) |
|
104-948, gnl|panTro1|chr15 (49584776-49585667) |
|
104-948, gnl|rheMac2|chr7 (113692706-113693596) |
|
104-948, gnl|rn3|chr6 (92084431-92085246) |
|
ret (0.7724) |
|
bfe (0.749288) |
|
gul (0.710353) |
|
isp (0.601504) |
|
cte (0.58548) |
|
mga (0.480615) |
|
ste (0.405625) |
|
fco (0.314416) |
|
fat (0.294855) |
|
liv (0.292569) |
|
pan (0.23596) |
|
mgp (0.230681) |
|
hea (0.204499) |
|
aor (0.195274) |
|
cmu (0.186393) |
|
mcp (0.170648) |
|
tbr (0.154178) |
|
lin (0.145603) |
|
lyg (0.133103) |
|
sug (0.127291) |
|
tra (0.123092) |
|
cbl (0.114797) |
|
ldo (0.0970026) |
|
ret (0.7724) |
|
bfe (0.749288) |
|
gul (0.710353) |
|
isp (0.601504) |
|
cte (0.58548) |
|
mga (0.480615) |
|
ste (0.405625) |
|
fco (0.314416) |
|
fat (0.294855) |
|
liv (0.292569) |
|
pan (0.23596) |
|
mgp (0.230681) |
|
hea (0.204499) |
|
aor (0.195274) |
|
cmu (0.186393) |
|
mcp (0.170648) |
|
tbr (0.154178) |
|
lin (0.145603) |
|
lyg (0.133103) |
|
sug (0.127291) |
|
tra (0.123092) |
|
cbl (0.114797) |
|
ldo (0.0970026) |
