Non-Coding RNA Search

Ss1.1-rcbr0_003263.5

Sequence:


               
               TCCTCTTAATAAGCATTTTATACTTCATTCCAAAGTGATACAGACTTAAGCCTTTAATAT
TAGTCAGTCATTCAGTTGATAGACAAAGTTAACAATGCTTTATGTTAGGAGCAGAGTTTT
GTTATTGGCAACAACTTGCACTACTTTACGCAAAAGGCAAACATTAGTGATTATTATGCA
CAAAGGAAAATGAATTATTATAAGTATGTGGTAAAGCAGCTTTATCTTTATTTCAAAATT
GATTTTGCTTCCATAGTTCATTAGGGTTTAGAATGTCTTGGGAAACTTAGTTACATATTA
AGGCGATCTGTTTTGGTTTTTTTTTTAAGAAAGACAGTTATATGGAACCAACTTTTTTTC
TGTTACATACCACTTGTGTGATTACAGTGTTAGGTCTTGAGACAGAAAAGTGTAACAGTT
ATTTTAAATGAATTTTTCCCATCTTTGAAGCTTAGTTTGTAGATGTATTGCTATAAAAGA
AAATGCTTGGTTTGCATCACTTGAATACTTGAAAACTGAAATAAGATGTATTACATAATA
GACTTTTCTGAACAGTTTTTACACTAAAATTTTCCTTTCTGGGTCATAATTTGACCAATT
TCAATTATTCGAATAGAAAAAAGAATGATAATACTTAACAGAAAATACCCTTTTGAGTTT
GAGGCATTCAGAATTCAAGTTTTCAGTAGGTTTCTGTCCTGAAATCTCTTTCTCTTCTTT
ACTATACTTAATGCACTTACTGTGCTACTGATGTTATCAAACAGCAAGTTAAAATATGTG
TTCATTATGTATCCTATGGCTTTTCTAGTTATGAAAAAATTACTCTGAAAAATACTCTTA
ATCCCTAAGAGTATAAATACCATTGATGGAATAAACACCATTAATCATTTTAACAAAATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCTCTTAATAAGCATTTTATACTTCATTCCAAAGTGATACAGACTTAAGCCTTTAATAT
TAGTCAGTCATTCAGTTGATAGACAAAGTTAACAATGCTTTATGTTAGGAGCAGAGTTTT
GTTATTGGCAACAACTTGCACTACTTTACGCAAAAGGCAAACATTAGTGATTATTATGCA
CAAAGGAAAATGAATTATTATAAGTATGTGGTAAAGCAGCTTTATCTTTATTTCAAAATT
GATTTTGCTTCCATAGTTCATTAGGGTTTAGAATGTCTTGGGAAACTTAGTTACATATTA
AGGCGATCTGTTTTGGTTTTTTTTTTAAGAAAGACAGTTATATGGAACCAACTTTTTTTC
TGTTACATACCACTTGTGTGATTACAGTGTTAGGTCTTGAGACAGAAAAGTGTAACAGTT
ATTTTAAATGAATTTTTCCCATCTTTGAAGCTTAGTTTGTAGATGTATTGCTATAAAAGA
AAATGCTTGGTTTGCATCACTTGAATACTTGAAAACTGAAATAAGATGTATTACATAATA
GACTTTTCTGAACAGTTTTTACACTAAAATTTTCCTTTCTGGGTCATAATTTGACCAATT
TCAATTATTCGAATAGAAAAAAGAATGATAATACTTAACAGAAAATACCCTTTTGAGTTT
GAGGCATTCAGAATTCAAGTTTTCAGTAGGTTTCTGTCCTGAAATCTCTTTCTCTTCTTT
ACTATACTTAATGCACTTACTGTGCTACTGATGTTATCAAACAGCAAGTTAAAATATGTG
TTCATTATGTATCCTATGGCTTTTCTAGTTATGAAAAAATTACTCTGAAAAATACTCTTA
ATCCCTAAGAGTATAAATACCATTGATGGAATAAACACCATTAATCATTTTAACAAAATA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               3-893, gnl|bosTau2|chr5 (50133387-50132462)
               

               
               3-893, gnl|Hg17|chr12 (22732772-22733705)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-893, gnl|bosTau2|chr5 (50133387-50132462)
               

               
               3-893, gnl|Hg17|chr12 (22732772-22733705)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               cbr (4.99104)
               

               
               med (0.232504)
               

               
               cbl (0.229595)
               

               
               fhi (0.169578)
               

               
               spl (0.143184)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbr (4.99104)
               

               
               med (0.232504)
               

               
               cbl (0.229595)
               

               
               fhi (0.169578)
               

               
               spl (0.143184)

	3-893, gnl\|bosTau2\|chr5 (50133387-50132462)
	3-893, gnl\|Hg17\|chr12 (22732772-22733705)

	cbr (4.99104)
	med (0.232504)
	cbl (0.229595)
	fhi (0.169578)
	spl (0.143184)